KEGG   Danio rerio (zebrafish): 541393
Entry
541393            CDS       T01004                                 
Symbol
cdh6
Name
(RefSeq) cadherin-6 precursor
  KO
K06798  cadherin 6, type 2, K-cadherin
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    541393 (cdh6)
Cell adhesion molecules [BR:dre04515]
 Cadherins
  Major cadherins
   541393 (cdh6)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_3 7TM_GPCR_Srw
Other DBs
NCBI-GeneID: 541393
NCBI-ProteinID: NP_001013538
ZFIN: ZDB-GENE-050320-92
Ensembl: ENSDARG00000014522
UniProt: Q5WN09
LinkDB
Position
2:complement(28049049..28102410)
AA seq 794 aa
MRTWIVLLLWACAHISVNAIALSRGPVRRKSKEIEGRQDKGLLRRSKRGWMWKQFFLQEE
YTGSEHQYIGKLHSDMDRGDGTVMYVLTGEGAGTIFVIDANSGDLHATRSLDREEKPSYS
LRAQAVNRKTGIPLEPETEFIVKLHDINDNEPKFDKEVYTASVPEGSHIGTFVTQVTAQD
ADDEMFGYSAKLAYSIKEGHPYFSVEPNTGIIRTALGPTDMDREQREHYQVVIEAKDMAG
QKGGLIGSTTVNISLTDINDNAPHFKQGIYQFSVPELTKVGSSVGRIEAEDADIGRNAEM
SYSITGGDSLDVFDISTDRNTQEGILTVKKPLDYEKKKSYTLQIEVKNTHPYSHYMSQDT
KDKATIRISVEDVDEPPQFEKISYILEVKEDAAVGTMIGSVSAVDPDMRRSPVKYSIDRH
TDVDRIFGIYAGNGSIFLQKPLDREEFAWHNISVIASEFRHLDNPEQTSRVPVYIRVLDV
NDNPPVLASFYETFVCENAKAGQKIQTISAVDPDEPVGGHRFLFSLAPESSVRANFSVRD
NGDNTAGIFTRRSGFGRMHKSTHLVAVVISDGHFPMQSSTGTLTIRVCTCDRDGNMEMCN
AEALTSSAGLSTGALVAILLCILILLLIVVLFAALKRQKKKEPLIISKEDVRDNVVSYND
EGGGEEDTQAFDIGALRHPEVMEDSKLRRDILPSESLYPPPPLRRTIVPARENADVRDFI
NQRVEENDGNPTAPPYDSLATYAYEGNGSVAESLSSLGSVSSEGEQDYNYLSEWGPRFRK
LADMYGGEDSDWDS
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgaggacttggattgtacttcttctgtgggcatgtgcacacatcagtgtgaatgcaatt
gccctttcaagagggccggttcgaaggaaaagcaaagaaattgaaggacggcaagacaaa
gggttgctgagacgttcaaagcgaggatggatgtggaaacagttttttctgcaggaggaa
tacaccggatccgagcaccagtatattggcaagcttcactcagatatggatagaggagat
ggcacggtgatgtacgtcctcacaggtgaaggcgccggcaccatctttgtcattgacgcc
aactcaggagatctgcacgctaccaggagcctggacagagaggagaagccttcctactcg
ctcagagctcaggctgtcaacaggaagaccggcatcccgctggagccagagactgagttc
attgtgaagctgcatgacatcaatgacaatgagcccaagtttgacaaggaggtctataca
gcatctgtacctgaggggtctcacattggtacctttgtcactcaagtgaccgcccaggat
gcagatgatgaaatgttcggctacagtgctaagctagcatacagtatcaaagagggccat
ccatacttctcagtagagccaaatacaggaataatccggactgctttgggacctaccgat
atggatagagagcaaagggagcactaccaagtggtgatcgaagccaaggacatggccggc
cagaagggaggcttaataggctccacaacagtcaacattagcctcaccgatatcaacgac
aacgccccacacttcaagcagggaatatatcagttcagcgttccagaactcaccaaggta
ggatcatcagttggcaggattgaggctgaggatgccgacatcggcagaaacgctgagatg
tcctacagcattactggcggagacagtctggatgtgtttgacatcagcactgacaggaac
acccaagaaggcatactaactgtaaagaagcctctggactatgagaagaagaaatcatac
actcttcaaatcgaggttaaaaacacacacccatactcgcactatatgagccaggacacc
aaagacaaggcgaccatccggatcagtgtcgaggatgtggatgagccccctcagtttgag
aaaatcagctatattttggaggtgaaagaggacgcggccgtgggcaccatgatcggatcg
gttagtgccgtggatcctgacatgcgccgcagcccggtcaagtattccatcgaccgccac
acagacgtggaccgtatttttggtatctacgctgggaacggctctatattcctgcagaaa
cctctggatcgagaggaattcgcctggcacaacatctctgtgatcgccagcgagttcagg
cacttagacaacccggagcagaccagccgtgtgcctgtgtatattcgtgtgctggatgtt
aatgataacccacctgtgctggcatctttctacgagaccttcgtttgtgaaaacgccaaa
gccggtcagaaaatccagacaataagtgcggtggatccagacgagccggtcggtggtcat
cgcttcttgttctccttagcgccagagagctcagtgcgagcaaacttctcggtgcgagat
aatggagataacactgctgggatcttcacccgccgcagcggttttggccgaatgcacaag
agcactcatctggtggctgtggtgatctcagatggacactttccaatgcagagcagtact
gggacgcttacaattcgggtgtgcacatgcgaccgggacggcaatatggaaatgtgcaat
gctgaggcgctgaccagctccgcggggctcagcacaggggcgctggtggccatcttgctc
tgcattctcatcctgcttttgatcgtggtgctgtttgctgctctgaaacgacagaaaaag
aaggagccgctgatcatctctaaggaggacgtgcgggacaatgttgtcagctacaatgat
gagggtggcggcgaggaggacacgcaggccttcgacatcggagcgcttcgccatccggaa
gtaatggaggacagcaaactgcggcgggacatcctaccatctgagtcgttgtaccccccg
ccaccgctccgcaggaccatcgtgccggcccgagaaaacgcagacgtacgggactttatc
aaccagcgtgtggaggaaaatgacggcaaccctaccgctcctccttatgactctctggcc
acctacgcctacgaaggtaatggatcggtggcagagtctctcagctcgctggggtctgtg
tcttcggaaggggaacaggactataactacctcagcgagtgggggccgcgcttcaggaag
ctagcagacatgtatggtggagaggacagcgattgggactcctaa

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