Danio rerio (zebrafish): 541393
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Entry
541393 CDS
T01004
Symbol
cdh6
Name
(RefSeq) cadherin-6 precursor
KO
K06798
cadherin 6, type 2, K-cadherin
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
541393 (cdh6)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Major cadherins
541393 (cdh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
541393
NCBI-ProteinID:
NP_001013538
ZFIN:
ZDB-GENE-050320-92
Ensembl:
ENSDARG00000014522
UniProt:
Q5WN09
LinkDB
All DBs
Position
2:complement(28049049..28102410)
Genome browser
AA seq
794 aa
AA seq
DB search
MRTWIVLLLWACAHISVNAIALSRGPVRRKSKEIEGRQDKGLLRRSKRGWMWKQFFLQEE
YTGSEHQYIGKLHSDMDRGDGTVMYVLTGEGAGTIFVIDANSGDLHATRSLDREEKPSYS
LRAQAVNRKTGIPLEPETEFIVKLHDINDNEPKFDKEVYTASVPEGSHIGTFVTQVTAQD
ADDEMFGYSAKLAYSIKEGHPYFSVEPNTGIIRTALGPTDMDREQREHYQVVIEAKDMAG
QKGGLIGSTTVNISLTDINDNAPHFKQGIYQFSVPELTKVGSSVGRIEAEDADIGRNAEM
SYSITGGDSLDVFDISTDRNTQEGILTVKKPLDYEKKKSYTLQIEVKNTHPYSHYMSQDT
KDKATIRISVEDVDEPPQFEKISYILEVKEDAAVGTMIGSVSAVDPDMRRSPVKYSIDRH
TDVDRIFGIYAGNGSIFLQKPLDREEFAWHNISVIASEFRHLDNPEQTSRVPVYIRVLDV
NDNPPVLASFYETFVCENAKAGQKIQTISAVDPDEPVGGHRFLFSLAPESSVRANFSVRD
NGDNTAGIFTRRSGFGRMHKSTHLVAVVISDGHFPMQSSTGTLTIRVCTCDRDGNMEMCN
AEALTSSAGLSTGALVAILLCILILLLIVVLFAALKRQKKKEPLIISKEDVRDNVVSYND
EGGGEEDTQAFDIGALRHPEVMEDSKLRRDILPSESLYPPPPLRRTIVPARENADVRDFI
NQRVEENDGNPTAPPYDSLATYAYEGNGSVAESLSSLGSVSSEGEQDYNYLSEWGPRFRK
LADMYGGEDSDWDS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaggacttggattgtacttcttctgtgggcatgtgcacacatcagtgtgaatgcaatt
gccctttcaagagggccggttcgaaggaaaagcaaagaaattgaaggacggcaagacaaa
gggttgctgagacgttcaaagcgaggatggatgtggaaacagttttttctgcaggaggaa
tacaccggatccgagcaccagtatattggcaagcttcactcagatatggatagaggagat
ggcacggtgatgtacgtcctcacaggtgaaggcgccggcaccatctttgtcattgacgcc
aactcaggagatctgcacgctaccaggagcctggacagagaggagaagccttcctactcg
ctcagagctcaggctgtcaacaggaagaccggcatcccgctggagccagagactgagttc
attgtgaagctgcatgacatcaatgacaatgagcccaagtttgacaaggaggtctataca
gcatctgtacctgaggggtctcacattggtacctttgtcactcaagtgaccgcccaggat
gcagatgatgaaatgttcggctacagtgctaagctagcatacagtatcaaagagggccat
ccatacttctcagtagagccaaatacaggaataatccggactgctttgggacctaccgat
atggatagagagcaaagggagcactaccaagtggtgatcgaagccaaggacatggccggc
cagaagggaggcttaataggctccacaacagtcaacattagcctcaccgatatcaacgac
aacgccccacacttcaagcagggaatatatcagttcagcgttccagaactcaccaaggta
ggatcatcagttggcaggattgaggctgaggatgccgacatcggcagaaacgctgagatg
tcctacagcattactggcggagacagtctggatgtgtttgacatcagcactgacaggaac
acccaagaaggcatactaactgtaaagaagcctctggactatgagaagaagaaatcatac
actcttcaaatcgaggttaaaaacacacacccatactcgcactatatgagccaggacacc
aaagacaaggcgaccatccggatcagtgtcgaggatgtggatgagccccctcagtttgag
aaaatcagctatattttggaggtgaaagaggacgcggccgtgggcaccatgatcggatcg
gttagtgccgtggatcctgacatgcgccgcagcccggtcaagtattccatcgaccgccac
acagacgtggaccgtatttttggtatctacgctgggaacggctctatattcctgcagaaa
cctctggatcgagaggaattcgcctggcacaacatctctgtgatcgccagcgagttcagg
cacttagacaacccggagcagaccagccgtgtgcctgtgtatattcgtgtgctggatgtt
aatgataacccacctgtgctggcatctttctacgagaccttcgtttgtgaaaacgccaaa
gccggtcagaaaatccagacaataagtgcggtggatccagacgagccggtcggtggtcat
cgcttcttgttctccttagcgccagagagctcagtgcgagcaaacttctcggtgcgagat
aatggagataacactgctgggatcttcacccgccgcagcggttttggccgaatgcacaag
agcactcatctggtggctgtggtgatctcagatggacactttccaatgcagagcagtact
gggacgcttacaattcgggtgtgcacatgcgaccgggacggcaatatggaaatgtgcaat
gctgaggcgctgaccagctccgcggggctcagcacaggggcgctggtggccatcttgctc
tgcattctcatcctgcttttgatcgtggtgctgtttgctgctctgaaacgacagaaaaag
aaggagccgctgatcatctctaaggaggacgtgcgggacaatgttgtcagctacaatgat
gagggtggcggcgaggaggacacgcaggccttcgacatcggagcgcttcgccatccggaa
gtaatggaggacagcaaactgcggcgggacatcctaccatctgagtcgttgtaccccccg
ccaccgctccgcaggaccatcgtgccggcccgagaaaacgcagacgtacgggactttatc
aaccagcgtgtggaggaaaatgacggcaaccctaccgctcctccttatgactctctggcc
acctacgcctacgaaggtaatggatcggtggcagagtctctcagctcgctggggtctgtg
tcttcggaaggggaacaggactataactacctcagcgagtgggggccgcgcttcaggaag
ctagcagacatgtatggtggagaggacagcgattgggactcctaa
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