Danio rerio (zebrafish): 541410
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Entry
541410 CDS
T01004
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
541410 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dre01004
]
541410 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
541410 (slc27a1a)
Lipid biosynthesis proteins [BR:
dre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
541410 (slc27a1a)
Transporters [BR:
dre02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
541410 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
541410
NCBI-ProteinID:
NP_001013555
ZFIN:
ZDB-GENE-050320-112
Ensembl:
ENSDARG00000006240
UniProt:
Q5BL26
LinkDB
All DBs
Position
3:52545014..52603683
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AA seq
647 aa
AA seq
DB search
MHYVASGSLSLGSLGLLRLFGASWSWSLAAGLSVYLGTGGWRYLYVVVRTAKRDINGLYV
LLRVKLALWHYMRNRNTIPSIFAQTVARHPDKPALVYEATGETWTFSQLDQISNAVAHWA
LSQGWTSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDSLLHCVGVSASRGIV
FGAELADAVSEVSHSLSQTMVRFSTGDLKPDLMAALKCQPLDPILASAPRHPPSCTVSKG
FNDHLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYLSFRMRPDDIIYDCLPLYHSAGNIM
GVGQCLIHGLTVVVKRKFSASRFWEDCIKHNCTVVQYIGEICRYLLAQPVRPSERQHRVR
LAVGNGLRPSVWEAFVERFRVKQIGEFYGATGCNCSIANMDGKVGACGFNSRILPNVYPI
RLVKVNEETMELVRDKQGLCVSCRPGEPGLLVGRINQQDPLRRFDGYASQEATRKKIAYN
VFRKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTEVEGTLSGLLRQTDVAV
FGVNVPGVEGKAGMAAIADSTGSFNCNSFLKEVQQALPPYARPIFLRICPCVDTTGTFKI
QKTRLQREGYDPRLTTDQIYFLNSRAGRYELVNEELYNAFEQGRISL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgtggcgagtggctccctgtctttggggtccctgggcctgctccgcctgttt
ggggcatcctggtcctggagcctggcagcaggtctgagtgtttatttgggcactggaggc
tggcggtacctgtatgtggtggttcggacggctaaaagggacatcaatggtctttatgtg
ctgctgagggttaaactggcactatggcattatatgcgcaaccgaaacaccataccctcc
atctttgcacaaactgtggctcggcacccggacaagcctgcgcttgtgtatgaagccact
ggggagacatggactttctcccagttagatcagatctccaatgctgtggcccactgggca
ctgagccagggctggacctcaggagatgtggtggcgctgttcatggagagcagacccctt
caggtggcactctggctgggcctggccaaagtcggtgtggaagctgcactcattaacttc
aacctgcgaagggattcgctcctgcactgcgtgggtgtttcagcttccaggggaattgtt
tttggagcagagcttgctgacgctgtgtctgaagtgagccactccttgagtcagaccatg
gtgcggttcagcacaggagaccttaaaccagacctgatggccgctctcaagtgtcagcct
cttgaccccatcctggcatctgcccctcgacacccaccatcctgcactgtgtccaagggc
ttcaatgatcatttgttctacatctacacgtctggcaccacaggactccctaaagctgct
atagtggtgcacagccggtattacaggattgctgctttcggctacctttcttttcgtatg
cggccagatgacatcatttatgactgtttacccctttaccactcagcaggtaatataatg
ggggtgggccagtgtctgattcatggtttaactgtggtggtcaagaggaagttttcagca
agtcgcttttgggaagactgcatcaaacacaactgcactgttgttcagtatataggagag
atctgccggtatctgcttgctcaacctgtgcgtccctctgagcggcagcatcgtgtgcgt
ttggctgtggggaacggcctgcgacccagtgtgtgggaggccttcgtcgagcgcttcaga
gtcaagcagatcggcgaattttacggagccaccgggtgcaactgcagcatcgccaacatg
gacggcaaggttggagcttgtgggtttaacagtcgcatcctgccaaacgtgtaccccatc
cggctagtgaaggtgaacgaggagaccatggagcttgttcgggacaagcagggactgtgt
gtgtcttgcagacctggagagcctgggctgttggtgggcagaataaatcagcaggatcct
ctgcgtcggtttgacggctacgcgagtcaagaagccaccaggaagaagatcgcctacaat
gtgttcaggaaaaacgactctgcctatctgtcaggtgatgttttggtaatggacgagctt
ggatacatgtatttccgagaccgaagcggagacacgtttcgttggaaaggagagaacgtg
tccaccactgaagtagagggaacgctgagcggcctgttgagacagactgatgtggcagtg
tttggagtaaacgtaccaggtgtggagggaaaagcgggaatggctgccatcgctgactcg
actggaagcttcaactgtaattctttcctaaaagaggttcagcaagctcttcctccatat
gcacggccaatatttctacgcatctgcccatgtgtagataccacaggaacgtttaaaatc
cagaagaccagactgcaaagggaaggatacgatccacggctcacaactgaccagatctac
ttcctaaactccagagcagggcgttacgagcttgtcaacgaggagctgtacaatgcattt
gaacaaggcaggatttccctttag
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