Danio rerio (zebrafish): 541437
Help
Entry
541437 CDS
T01004
Symbol
ptbp2a
Name
(RefSeq) uncharacterized protein LOC541437
KO
K14948
polypyrimidine tract-binding protein 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
541437 (ptbp2a)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
541437 (ptbp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
541437
NCBI-ProteinID:
NP_001315358
ZFIN:
ZDB-GENE-050320-141
Ensembl:
ENSDARG00000101947
UniProt:
A0A0R4IZG6
LinkDB
All DBs
Position
24:complement(30834160..30862177)
Genome browser
AA seq
512 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGGMYNSPSSGLSSISDTTSNGSDSKKLRVEERVGDAPPSR
VLHIRKLPNDVSEAEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRSVPVYIQYSNHKELKTDNSSQSGGTSTSGSNSSDGSGSASSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPACAQQAKVALDGQNIYNACCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDVAAALSKDSSSLLGKIPGALSPLSAAA
AAAAAAGRVALSGHSSSGGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDSAL
IQMADMNQAQLAMSHLNGQKMFSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLHRF
KKPGSKNFQNIFPPSATLHLSNIPQDVTEEDLRVLFSNSGGTVKAFKFFQDHKMALIQMS
TIEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgacgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcggcatgtataacagccctagttctgggttgagcagtatcagtgatacaacatccaat
ggcagtgacagcaaaaaactcagagttgaagagagagtcggcgacgccccgccatcccgt
gttctccacatcagaaagttacctaacgatgtgtctgaagcagagatcattgctctgggg
cttcctttcggaaaggtcaccaatattctcacactgaaaggcaaaaaccaggcgtttctg
gagctcagcacggaggaagctgctatgacaatggtcaattattactccgctgtgacgcct
catgtccgtagtgtgcctgtctacatacagtattccaatcacaaagaactcaagactgac
aattcaagccagtcaggtgggacttccacatcagggtccaactctagtgacggtagcggt
tcggcctccagtccagtgctaaggataatcatagataacatgttttaccctgtcaccctg
gatgtgctgcagcagattttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaagccctgttgcagtacaacgatccagcttgtgcgcagcaagct
aaagtggctctagatggtcagaacatttacaacgcctgctgtactcttcgtatagactac
tcaaagcttgtcaatctgaatgtgaaatacaataacgataagagcagggattataccaga
ccggagcttccagctggagatgggcagcccgctttggatgttgctgctgccttgagtaaa
gactccagttccctgcttgggaagatccctggtgctctgagcccgttgagtgcggctgct
gctgccgctgcggctgctggaagagtggctctgtccgggcactctagctctggtggtgtg
ctgctcgttagcaatctaaacgaagagatggttacgccccacagtctgtttaccctcttc
ggagtttatggagacgtgcagcgcgtgaagatcctttttaataagaaagacagcgcactg
atacagatggccgatatgaaccaggctcagcttgcgatgagccatctaaacggtcagaag
atgttttcaaagatcatcagagtcacaatgtccaagcaccagaccgttcagctgccgaga
gacggtttagatgaccagggtctcaccaaagacttcaccaactcgccgctacatcgcttc
aaaaagcctggctccaagaacttccagaacatcttccctccttctgccacgctgcatctg
tcaaacatcccgcaagacgttactgaagaagacctcagagtcctgttctccaactccggc
ggcactgtgaaagctttcaagtttttccaagatcataaaatggccctgattcagatgtcg
accatcgaagaagccattcaatgcctgatcgacctccacaattacaacatgggtaataac
caccacctgaaggtctccttttccaaatccaccatctga
DBGET
integrated database retrieval system
