Danio rerio (zebrafish): 541474
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Entry
541474 CDS
T01004
Symbol
cntn1b
Name
(RefSeq) contactin 1b precursor
KO
K06759
contactin 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
541474 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
541474 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
541474 (cntn1b)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
Contactins
541474 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
Others
541474 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
CsgH
Motif
Other DBs
NCBI-GeneID:
541474
NCBI-ProteinID:
NP_001014814
ZFIN:
ZDB-GENE-041210-236
Ensembl:
ENSDARG00000045685
UniProt:
Q597F7
LinkDB
All DBs
Position
4:13733838..13756711
Genome browser
AA seq
1031 aa
AA seq
DB search
MATPGPAMLLSLFSCFFLLAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPEN
KISMNCRVRANPPAIIKWWLNNWQIKLMEQPDEHFSLVGGNLVITNPEKNKHAGKYVCVA
KNVYGTVMSKEANVKFGYLNQFPTDEREPVNVKEGQGAVLLCTPPSRYPDEVMFRWIYND
FPNFIIPDQRRFVSQSTGNLYIAKVEPSDVGNYSCFVSSPTIGKSVFSMPIALIPQIEKE
VKRYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLH
LINVQYEDEGSYECETLNVKGMDWYRQWLYVEGPPEWAEHINDTEKDVGSELTLRCVAVG
KPIPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEWGTIYANAELRVVSCAPTFI
YNPVKKILLGAENGRVVIECNPRAAPKPRFIWKRGSELLSNSSRIFIWDDGSLEILNATK
SDEGSYTCYAENDRGKSNSTGTLTITEATKITVGPSNSEAAVGDTIVLQCSASYDPSLDV
TFIWTVDSYSINFYTDFEHYELDMDHENSGDLLIKNIQIRHAGHYICTAQTIVDNATAEA
DVFVRGLPGPPGGVRVEEIGDTSVKIRWCLGSDHGSPLIQHIVQTRDFYALDPEDWKTAT
TTPAFLNGSTESATVVDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDV
IGQVGISGELIVTWNPVKPQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETRRYVYKESM
TPDTEIQIKVSTFNNKGEGPASLISVVYSPRIAPTEAPLDVYARQVTSTEALVWWLPVYQ
APPMWVDGYQIRYWRKYDDNEAAASRVIVHRTVNQTRLENMRPDSHYLIEVRAFNGAGLG
PPSEHCEMFTRRPPPSRRLRVYKYVSFTRKWLYLYWDHIYNYWNESYVEGYKILFRKEGE
RYGKLYTTGRHYIDFPMPETGDYVIELRARCEGGDGPISQIRVQGKAAVGVESVSVVSVL
LLALAWTTLGL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaggcccagccatgctattgtctcttttctcctgcttcttcctattagca
gctgcaattaaacccaggatctttgaacccaggatttttgacaaggaggccactggcttt
gggcccatatttgaggaagagcctctggacactgtgtacgcggaggattcacctgaaaac
aaaatatctatgaactgcagggtgcgtgcaaacccaccggccattatcaagtggtggtta
aacaactggcaaattaagctgatggagcagccggatgagcacttcagcctggttggagga
aacctggtcattacaaacccagaaaaaaacaagcatgctggaaaatatgtatgtgtggcc
aagaacgtgtacggcaccgtcatgagcaaagaggccaacgtcaagtttggatacctgaac
cagtttcctacagatgagagagagccggtgaatgtgaaggaaggacagggagctgttctg
ctgtgtacacctccctctcgctatccagatgaggtgatgttccgctggatctacaatgac
ttccccaacttcatcatcccagatcagcggcgcttcgtctctcagagcaccgggaatctg
tacattgcgaaagtcgagccgtctgatgtcggcaattattcctgttttgtgtcgagcccc
accatcggcaagagtgttttcagcatgcctatagcactgattccacagatagagaaggaa
gtgaagcgatatcctgctgatatccgggtgaaatttcctaagacgtatgctttggtgcac
cagaacatcactctggagtgctttgcacttggaaatcctcttccacacattcgctggagg
aagctagacgctgatctcccgccaaactatgaagtcagcatgaatggagctttacttcac
ctgatcaacgtccagtatgaggacgagggcagctacgagtgtgagacgctcaatgtgaaa
gggatggactggtatcgacagtggctctatgttgaaggtcctccagagtgggcggagcac
atcaatgacacggagaaagatgtcgggagtgaactgactctcagatgtgttgctgttggg
aaaccaataccatggatacgttggctaaaagacggctattcgtatggcaaaggggagctg
aagttttccagtctcacgtttgaggattcgggcatgtatcagtgcattgctgagaatgaa
tggggaaccatctacgccaatgcagagcttcgggttgtctcctgtgctccgacgttcata
tataacccagtgaagaagattctgcttggggctgaaaatggacgtgtggtcatagagtgc
aatccccgtgctgctcccaaacccagattcatctggaaacgaggctcggagctcctgagc
aactcctcaaggatattcatttgggacgatggaagtctggagattctgaatgcaacaaaa
agtgacgagggctcatacacctgctatgctgagaatgatcgtggcaaatccaacagcact
gggaccctcactattactgaggccaccaagatcacagttggcccatcaaactctgaggca
gctgtaggggatacaatagttctccaatgctctgcatcctatgatcccagtctggacgtc
accttcatctggactgtcgattcatacagcattaacttctacacagactttgaacactac
gagctggacatggatcatgagaatagcggagacctgctgatcaagaacattcagattaga
catgcaggacactatatctgcacagctcagactatagtggacaacgccaccgcagaagct
gatgtttttgtcagaggtttgcctggtcctccaggtggcgtccgtgtggaagaaatcggc
gacacatcagttaaaataagatggtgtttgggatcagatcacggtagtcctctcatccag
catatcgtgcaaacaagagacttttacgcccttgatcctgaagactggaaaaccgcaact
accactcctgcgtttctgaatggatctacagagtcagccactgtagttgatctttacccc
tggatgcaatatgagttcagagtgcatgccatcaatgaattcggagctggcgaaaacagt
cgtccgtccattaaaatcaagacatgggatgccaggccaacagtagctccttctgacgtc
attggacaagtgggaataagcggagagttgatcgtgacttggaatcctgtgaaacctcag
tttttctttgggaagaagtttggctatgttgtggcgttcaagcagcatgaggattatgag
tggaaatggtcaaccgtggaggatcccgagaccagacgttatgtgtacaaagagagcatg
acaccagatactgaaatacagatcaaagtcagcaccttcaataacaaaggagaaggaccc
gcaagtcttatatcagtggtttactcaccaagaatagcaccgactgaagccccactagat
gtgtatgcccgtcaggtcacctccacagaggctttagtctggtggttaccagtctaccag
gcaccaccaatgtgggtcgacggataccagatacgctactggagaaaatacgatgataat
gaagctgctgcatctcgagtcattgttcacagaactgtaaaccaaacccgtctggaaaac
atgcgacctgattcgcattaccttattgaggtgcgagcgtttaatggagcaggactggga
ccaccaagcgaacactgtgaaatgtttaccagaagaccccccccaagtcgtcgtttgaga
gtttacaagtatgtcagctttacacgcaaatggctgtatctgtattgggatcacatctat
aactactggaatgagtcttatgtggaggggtacaagattttgttccggaaggaaggtgag
cgttatgggaagctttacaccaccggcaggcactacattgacttccccatgccagaaact
ggtgattacgtcatagagctgcgagctcgctgtgagggaggagatggacccatttcacag
atcagagtacagggtaaagcagccgtgggtgttgaatctgtcagtgtggtctctgtcctg
ctgctggctctggcctggaccactttaggcctgtag
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integrated database retrieval system
