KEGG   Danio rerio (zebrafish): 541502
Entry
541502            CDS       T01004                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5
  KO
K10846  DNA excision repair protein ERCC-5
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    541502 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    541502 (ercc5)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     541502 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 541502
NCBI-ProteinID: XP_003197653
ZFIN: ZDB-GENE-050327-28
Ensembl: ENSDARG00000023678
UniProt: F1QJS3
LinkDB
Position
1:complement(474064..494289)
AA seq 1010 aa
MGVHGLWKLLESTGKPINPETLEGKILAVDISIWLNQAVKGVRDRDGNAVQNAHLLTLFH
RLCKLLFFRIRPVFVYDGDAPLLKKQTLAVRRQRREETNRESRQTSEKLLQTFLKRQAIR
AALGENSQESAPSLSSVRRDEHDDIYVLPALPPEDDRQESSSEEEKDGDEALHNYSRFQE
ELCDNPDAVDINSEQFSLMPPEIKHEILKEMKEFSKRRRTLLHKPPERSGEFSQYQLAGL
LQRNRLNQRLECVEQEMNQRSSGGHTDQQNTEIRRLVSEDSSHYILIKGGQKKVSAVATP
AAPALWSSSPWEPKGRNKGKPEPLWRPVSEEEENKPSSSSSSPEDQSAGAPASPRTLLAI
QSAMMESEDEDQQIQDSRSKTNIIPSSSKTEEQQIQNSRTRTHVITSSSSEDEDQHIQNS
RARTHIITSSSEDETEIRRTSDPAPGTTDLKLESRTPLSLASAASGSLEQTHTLQQDAES
SEDESRSSVILDCVRSETQRKTREEEEKEEESTVNQILQFRDSRDPSEKEEREDQPEENR
EKREEEEESSADESFVEVSDAEEPPETDESHINTHQTDYNTEEKEEEVEEEEESSAQSTD
QIEDVDESVNEAPAVSEWEHIDTEELQLLDRELQDEQQTLREQHQQQQRSSSTVTGQMCQ
ESQELLRLFGVPFIVAPMEAEAQCAALDRLDQTHGTITDDSDIWLFGGRHVYRNFFNQNK
YVEHYQIVDMQNQLGLDRSKLINLAYLLGSDYTEGIPGVGYVTGMEILNEFPGAGLEPLV
QLSEWWTEAQENKKLSVNPKDTKVKKKLRNLQIHPGFPNPAVAQAYLQPSVDQSDASFSW
GRPHLDLIKEFCQSRFGWSSRKTEETLQPVLKQLQSQQTQLRIDSFFRLEQQDRQQIRSE
RLRRAVICMKRKEREEEEEDESVSAQKQGRSEADEAPGPLAGGFISSDPQTSTQGGGAKQ
IRAESSSSSSEEEAESGKGVAMVTARSVFEGKTRGRGKKLLRGRGRSKNR
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgggagttcatggactctggaagctcctggaaagcaccggaaaacccatcaatccagaa
acactagaggggaagatcttagctgtcgacatcagcatctggctgaaccaggcggttaaa
ggtgttcgagatcgcgatgggaacgcagtgcagaacgctcacctgctcacgctcttccac
cgcctctgtaaactactgttcttccgcatcagacctgtgtttgtgtacgatggagacgcg
ccgctgctcaagaagcagaccctggccgtgcgcagacagcggagagaggagacgaaccga
gagtccagacagaccagtgagaagctcctgcagacgtttctgaagaggcaggccatcaga
gcggctctcggggagaacagtcaggagtcagcgcccagcctgtcgtcagtgcggagagat
gaacatgacgatatttatgttctacctgctcttcctcctgaagacgacagacaggagagc
agttcagaagaggagaaagatggagacgaggctctgcacaactacagcagattccaggag
gagctgtgtgataatcctgacgctgtggatataaactcagagcagttctccctcatgccg
cccgagattaaacacgaaatcctgaaagagatgaaggagttcagcaagagacgccgcaca
ctgctacacaaacctccagagcggtcaggggagttctcccagtatcagctggctggtctc
ctgcagaggaacagactgaaccagcggctggagtgtgtggagcaggagatgaaccagcgc
agctctggaggacacacagaccagcagaacacagagatccgccggctggtgtctgaggat
tcctcacactacatcctcatcaaagggggtcagaagaaggtcagtgctgtggccactcca
gcggctccagctctgtggtccagctctccatgggagcctaaaggaagaaataaaggaaaa
cctgagccgttatggagacccgtgtctgaagaagaagagaacaaaccttcatcctcatcg
tccagcccagaggatcagtcagcaggagctccagcatctcctcgaaccctgctggccatc
cagagtgccatgatggagtctgaggatgaagatcagcagatccaggacagcagatccaag
acaaacatcatccccagcagctctaagactgaagaacagcagatccagaacagcagaacc
aggacacacgtcatcaccagcagcagctcagaggatgaagatcagcacatccagaacagc
agagccaggacacacatcatcaccagcagctctgaagacgagacggagatcaggagaaca
tcagatcctgcacccggaaccacagacttaaagctggagtccagaacgccgctcagtctc
gcttctgcagcttctggaagtctagagcagacacacacactgcagcaggatgcggagtct
tcagaggacgagtccagaagttctgttattctcgattgtgtgagatctgaaacccagaga
aaaacacgtgaggaagaagaaaaagaagaagagtccacagtaaaccagattctgcagttc
agagactccagagatccatctgagaaagaggagagagaagatcagccggaggaaaacaga
gagaagagagaagaagaggaggagagcagcgctgacgagagttttgttgaggtgtctgat
gcagaggaaccacctgaaacagacgaatcacacatcaacacacaccaaactgactataat
acagaagagaaagaggaggaggtggaggaggaggaagagtccagtgcacagagcacagat
cagattgaagatgttgatgagtctgtgaatgaagctccggctgtcagtgagtgggagcac
atcgacacggaggagctgcagctgttggacagagagctgcaggatgagcagcagactctg
agagagcagcatcagcagcagcagcgcagcagctccaccgtcaccgggcagatgtgtcag
gagagtcaggagctgctgcgtttgttcggtgtgccgtttattgtggcgccgatggaggct
gaagctcagtgcgccgctctggaccgattggaccaaacgcacggcaccatcacagacgac
agcgatatctggctgttcggcggacgccatgtatacaggaacttcttcaaccagaacaaa
tacgtggagcattatcagattgtggacatgcagaaccagctgggtctggacagaagtaaa
ctcatcaatctggcgtatctgctggggagtgattacaccgagggcattcctggagtggga
tacgtcactgggatggagatcctcaatgagtttcctggagccggtctggagccgctcgtc
cagctcagtgaatggtggactgaagcgcaggagaataagaaactctccgtcaatcccaaa
gacacgaaagtgaagaagaaactgaggaacctgcagattcatcccggtttcccgaacccg
gccgtggctcaggcgtacctgcagcctagtgtcgaccaatcagatgcctccttcagctgg
ggccgcccacatctggatctcatcaaagagttctgccagagccgcttcgggtggagcagt
cggaagacggaggagacgctgcagccggtgctcaaacagctccaatcacaacagacgcag
ctgcgcatcgactcctttttccggctggagcagcaggatcgtcagcagatccgcagtgag
cgtctgcgcagagccgtcatctgcatgaagaggaaggagagagaagaggaagaagaggac
gagtcagtgtctgcacagaaacaggggcggagcgaagccgacgaggccccggggccgcta
gctggaggattcatcagctcagaccctcagaccagcacacaggggggtggagccaagcag
atcagggcggagtcgagcagctccagctcagaggaggaggcggagtccgggaagggtgtc
gctatggttaccgctcgatctgtgtttgaggggaaaacaagaggaagagggaaaaaactg
ttaagaggaagaggaagaagcaaaaacagatga

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