KEGG   Danio rerio (zebrafish): 544655
Entry
544655            CDS       T01004                                 
Symbol
nbn
Name
(RefSeq) nibrin
  KO
K10867  nibrin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03440  Homologous recombination
dre04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    544655 (nbn)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    544655 (nbn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dre03032]
    544655 (nbn)
   03400 DNA repair and recombination proteins [BR:dre03400]
    544655 (nbn)
DNA replication proteins [BR:dre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    544655 (nbn)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     544655 (nbn)
    BRCA1-C complex
     544655 (nbn)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT MU2_FHA
Other DBs
NCBI-GeneID: 544655
NCBI-ProteinID: NP_001014819
ZFIN: ZDB-GENE-041008-35
Ensembl: ENSDARG00000040303
UniProt: Q5I2W8
LinkDB
Position
16:23837991..23875322
AA seq 818 aa
MWKLQPTESGGESVILLAGQEYVVGRKNCEILLTNDQSISRVHAVLTVTEQAVTLKDSSK
YGTFVNGEKLESGSTKTLQTGYKITFGVFQSKFSLEKECIVVCSSCVDNEGKVTLSQDIR
SVGGRLVSSWTSDCTHLVMPTVKVTIKTICALLCCRPIVKPAFFSAFSKAVQQKLPLPKA
ERFRPQIDEPSLARDEVDLGARPERKSLFKGKTFLFLSSKQMKRLSVAVSCGGGVSQLLD
EGALPVSLLESSSTCVLDMISGNSQPVISPASKKWLDSVGQILHRKGLRFITESEVGLAA
IHVSNQTYCNPCSSLQSESVKTNPVFASATLSQSTAVDETALAAPSQNITAYVVNTEISQ
DQSRMVTSGISAVGETPEKTNPTQKASTTNKPLSLGQEPSSTRIVQETVMSSESFSVVES
EQKMKKGSVVSARGRVEGPVKQKAPSSGNTTLKHSPQKQTALTSFFQPSSKKRPRESSAS
SVQPEPKFFKKDIKDNEDDIQQSSSVNRSHKTSSEETSLGQACGTGQNSSSKKRKEPEQD
TLLGAEEPTAADDLEMSLEELEFLMSDEMDEPPQTAANKKQRLESGLTSKINSEQLSNQQ
EVTESKGRKGEKNQQSSSSNIQSMQLDRAGPAVTNQDTQTQSKRSPPDLEAHSSANKGPT
KNKTPELEEVKKEEVSFVVNSRPQNGISQTSEAVLKQEMRASTSNSGPKNDPDLPRKLLQ
VQFMSLTVNNSSRSRPGPLQTHNPNDKNVKRFRKKNVPGFDGLPKIIGGSDLVAHNRSKH
SELEEWLRQAAEEEKLNEREEYLGDDLFRYNPRPAKKR
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgtggaaactgcagccaaccgaatctggaggggaaagtgtcattctgctggctggacag
gagtatgtggttggccgtaagaattgtgagatcctgctgaccaatgatcagtccatcagc
cgtgttcatgctgtcctcactgtcactgagcaggcagtcactctgaaggacagctctaaa
tatggaacttttgtcaatggtgagaagcttgagtctggctccacaaagaccttgcagaca
ggatacaaaatcacatttggagtcttccagagcaaattcagtctggagaaagagtgtatt
gtggtttgctcctcgtgtgtggataatgaagggaaagtcaccctgtctcaagatattcgc
tctgttggaggacgacttgtcagttcctggacctctgactgcacacatctagtcatgccc
actgtaaaagtcaccataaagacgatctgtgcgttgctatgctgtcgacccatagtaaaa
cctgcgttcttcagtgcgtttagcaaagctgtgcagcagaaattgcccctgcctaaagct
gagagatttaggcctcaaattgatgagcccagcctggctagagatgaagtggatctgggt
gcacgacctgagagaaagagcctcttcaaggggaaaacattcctgtttttgagctctaaa
cagatgaagcgtttgagtgtggcagtgagttgtggtggtggtgtgagtcagctgctggac
gagggcgctctgcctgtctcactcctggagtccagcagcacatgtgtgctcgacatgatc
tcaggaaactcacagcctgtgatttctccagcctccaagaagtggttggattctgtgggc
caaattctgcacagaaaaggtttgcgctttatcactgaatctgaggttggattggctgcc
attcatgtcagtaatcagacatactgcaatccctgctcttctttgcaatcagaatcagtg
aaaacgaatccagtctttgcctcagcaacactttctcagagcacggctgtggatgagact
gcgctcgcggctccttcccagaatatcacagcctatgtcgtcaacactgaaatctcacag
gaccaaagcaggatggttacaagtgggatcagtgcagttggagagaccccagagaaaacc
aatcccacacagaaagcctcaacaaccaataaacccttatccctcggtcaggaaccttcc
tctacccgcatcgtccaagaaacagtgatgtcctctgagagcttcagtgtggttgaatct
gaacagaagatgaagaaagggtctgttgtctcagccaggggaagagttgaaggtcctgta
aaacagaaagcgccttccagtggcaacaccacattaaaacattctccccagaaacagaca
gccctcaccagcttcttccagccttccagcaagaaaaggccgcgtgaaagcagtgccagt
tctgtccagccagaacccaaattcttcaagaaagacatcaaagataatgaagatgacatc
cagcaaagctcttctgtcaatagatctcacaaaacctcatcagaggagaccagtctaggt
caggcttgtggaactggtcaaaactctagcagcaagaaaagaaaggaacctgagcaggac
accctattaggcgcagaagaaccaacagccgctgatgatttagaaatgtcacttgaagag
cttgaattcttaatgtccgacgagatggatgagcctccgcagactgcagctaataaaaaa
caacgtcttgagtcaggactgactagcaaaatcaatagcgaacaattatcgaatcagcaa
gaggtcactgagtctaaaggcaggaaaggggagaagaatcagcaaagcagttccagcaat
attcagagcatgcagttggacagagcaggaccagctgtaacaaatcaggacacacaaaca
cagtcaaagaggtcacctccagatctggaagcacatagttctgcaaacaaggggccaaca
aaaaacaaaacacccgagcttgaagaggtcaaaaaggaggaagtgtcctttgttgtgaat
tcaaggccccaaaatggcatttcccagacctctgaggctgttctcaaacaggaaatgcgg
gcctcaacctccaattccggacctaagaatgaccccgatctgcccaggaagctactgcag
gttcagtttatgtctctaacagtgaacaactcttccagatcaagaccaggcccattacag
acacacaatccaaatgacaagaacgtcaaaagatttcgcaagaaaaatgtccctggattt
gatgggctgcctaagataattggaggctcggatctggtggctcataatcgcagtaagcac
tctgaactagaggaatggctgagacaggcagcagaggaggagaagctgaacgaacgagag
gagtatttgggagacgatttgttcaggtacaaccctaggcctgcaaagaaacgatag

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