Danio rerio (zebrafish): 544655
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Entry
544655 CDS
T01004
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
dre04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
544655 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
544655 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
544655 (nbn)
03400 DNA repair and recombination proteins [BR:
dre03400
]
544655 (nbn)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
544655 (nbn)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
544655 (nbn)
BRCA1-C complex
544655 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
544655
NCBI-ProteinID:
NP_001014819
ZFIN:
ZDB-GENE-041008-35
Ensembl:
ENSDARG00000040303
UniProt:
Q5I2W8
LinkDB
All DBs
Position
16:23837991..23875322
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AA seq
818 aa
AA seq
DB search
MWKLQPTESGGESVILLAGQEYVVGRKNCEILLTNDQSISRVHAVLTVTEQAVTLKDSSK
YGTFVNGEKLESGSTKTLQTGYKITFGVFQSKFSLEKECIVVCSSCVDNEGKVTLSQDIR
SVGGRLVSSWTSDCTHLVMPTVKVTIKTICALLCCRPIVKPAFFSAFSKAVQQKLPLPKA
ERFRPQIDEPSLARDEVDLGARPERKSLFKGKTFLFLSSKQMKRLSVAVSCGGGVSQLLD
EGALPVSLLESSSTCVLDMISGNSQPVISPASKKWLDSVGQILHRKGLRFITESEVGLAA
IHVSNQTYCNPCSSLQSESVKTNPVFASATLSQSTAVDETALAAPSQNITAYVVNTEISQ
DQSRMVTSGISAVGETPEKTNPTQKASTTNKPLSLGQEPSSTRIVQETVMSSESFSVVES
EQKMKKGSVVSARGRVEGPVKQKAPSSGNTTLKHSPQKQTALTSFFQPSSKKRPRESSAS
SVQPEPKFFKKDIKDNEDDIQQSSSVNRSHKTSSEETSLGQACGTGQNSSSKKRKEPEQD
TLLGAEEPTAADDLEMSLEELEFLMSDEMDEPPQTAANKKQRLESGLTSKINSEQLSNQQ
EVTESKGRKGEKNQQSSSSNIQSMQLDRAGPAVTNQDTQTQSKRSPPDLEAHSSANKGPT
KNKTPELEEVKKEEVSFVVNSRPQNGISQTSEAVLKQEMRASTSNSGPKNDPDLPRKLLQ
VQFMSLTVNNSSRSRPGPLQTHNPNDKNVKRFRKKNVPGFDGLPKIIGGSDLVAHNRSKH
SELEEWLRQAAEEEKLNEREEYLGDDLFRYNPRPAKKR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaactgcagccaaccgaatctggaggggaaagtgtcattctgctggctggacag
gagtatgtggttggccgtaagaattgtgagatcctgctgaccaatgatcagtccatcagc
cgtgttcatgctgtcctcactgtcactgagcaggcagtcactctgaaggacagctctaaa
tatggaacttttgtcaatggtgagaagcttgagtctggctccacaaagaccttgcagaca
ggatacaaaatcacatttggagtcttccagagcaaattcagtctggagaaagagtgtatt
gtggtttgctcctcgtgtgtggataatgaagggaaagtcaccctgtctcaagatattcgc
tctgttggaggacgacttgtcagttcctggacctctgactgcacacatctagtcatgccc
actgtaaaagtcaccataaagacgatctgtgcgttgctatgctgtcgacccatagtaaaa
cctgcgttcttcagtgcgtttagcaaagctgtgcagcagaaattgcccctgcctaaagct
gagagatttaggcctcaaattgatgagcccagcctggctagagatgaagtggatctgggt
gcacgacctgagagaaagagcctcttcaaggggaaaacattcctgtttttgagctctaaa
cagatgaagcgtttgagtgtggcagtgagttgtggtggtggtgtgagtcagctgctggac
gagggcgctctgcctgtctcactcctggagtccagcagcacatgtgtgctcgacatgatc
tcaggaaactcacagcctgtgatttctccagcctccaagaagtggttggattctgtgggc
caaattctgcacagaaaaggtttgcgctttatcactgaatctgaggttggattggctgcc
attcatgtcagtaatcagacatactgcaatccctgctcttctttgcaatcagaatcagtg
aaaacgaatccagtctttgcctcagcaacactttctcagagcacggctgtggatgagact
gcgctcgcggctccttcccagaatatcacagcctatgtcgtcaacactgaaatctcacag
gaccaaagcaggatggttacaagtgggatcagtgcagttggagagaccccagagaaaacc
aatcccacacagaaagcctcaacaaccaataaacccttatccctcggtcaggaaccttcc
tctacccgcatcgtccaagaaacagtgatgtcctctgagagcttcagtgtggttgaatct
gaacagaagatgaagaaagggtctgttgtctcagccaggggaagagttgaaggtcctgta
aaacagaaagcgccttccagtggcaacaccacattaaaacattctccccagaaacagaca
gccctcaccagcttcttccagccttccagcaagaaaaggccgcgtgaaagcagtgccagt
tctgtccagccagaacccaaattcttcaagaaagacatcaaagataatgaagatgacatc
cagcaaagctcttctgtcaatagatctcacaaaacctcatcagaggagaccagtctaggt
caggcttgtggaactggtcaaaactctagcagcaagaaaagaaaggaacctgagcaggac
accctattaggcgcagaagaaccaacagccgctgatgatttagaaatgtcacttgaagag
cttgaattcttaatgtccgacgagatggatgagcctccgcagactgcagctaataaaaaa
caacgtcttgagtcaggactgactagcaaaatcaatagcgaacaattatcgaatcagcaa
gaggtcactgagtctaaaggcaggaaaggggagaagaatcagcaaagcagttccagcaat
attcagagcatgcagttggacagagcaggaccagctgtaacaaatcaggacacacaaaca
cagtcaaagaggtcacctccagatctggaagcacatagttctgcaaacaaggggccaaca
aaaaacaaaacacccgagcttgaagaggtcaaaaaggaggaagtgtcctttgttgtgaat
tcaaggccccaaaatggcatttcccagacctctgaggctgttctcaaacaggaaatgcgg
gcctcaacctccaattccggacctaagaatgaccccgatctgcccaggaagctactgcag
gttcagtttatgtctctaacagtgaacaactcttccagatcaagaccaggcccattacag
acacacaatccaaatgacaagaacgtcaaaagatttcgcaagaaaaatgtccctggattt
gatgggctgcctaagataattggaggctcggatctggtggctcataatcgcagtaagcac
tctgaactagaggaatggctgagacaggcagcagaggaggagaagctgaacgaacgagag
gagtatttgggagacgatttgttcaggtacaaccctaggcctgcaaagaaacgatag
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