KEGG   Danio rerio (zebrafish): 548343
Entry
548343            CDS       T01004                                 
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
  KO
K12309  beta-galactosidase [EC:3.2.1.23]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00052  Galactose metabolism
dre00511  Other glycan degradation
dre00531  Glycosaminoglycan degradation
dre00600  Sphingolipid metabolism
dre00604  Glycosphingolipid biosynthesis - ganglio series
dre01100  Metabolic pathways
dre04142  Lysosome
Module
dre_M00079  Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    548343 (glb1)
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    548343 (glb1)
  09107 Glycan biosynthesis and metabolism
   00531 Glycosaminoglycan degradation
    548343 (glb1)
   00604 Glycosphingolipid biosynthesis - ganglio series
    548343 (glb1)
   00511 Other glycan degradation
    548343 (glb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    548343 (glb1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    548343 (glb1)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.23  beta-galactosidase
     548343 (glb1)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   548343 (glb1)
SSDB
Motif
Pfam: Glyco_hydro_35 BetaGal_ABD_1 BetaGal_gal-bd Glyco_hydro_42 BetaGal_ABD2
Other DBs
NCBI-GeneID: 548343
NCBI-ProteinID: XP_005160189
ZFIN: ZDB-GENE-050410-9
Ensembl: ENSDARG00000036415
UniProt: A0A8M2B6W2
LinkDB
Position
1:55804114..55822820
AA seq 651 aa
MTPGVGLVSVLLLIIPATTYATTPTFSVDYHRNCFLKDGEPFRYISGSIHYSRIPRVYWK
DRLLKMYMAGLNAIQTYVPWNFHEAVPGQYDFSGDRDLEQFLQLCQDIGLLVIMRPGPYI
CAEWDMGGLPAWLLKKKDIVLRSSDPDYLAAVDKWMGKLLPIIKRYLYQNGGPIITVQVE
NEYGSYFACDFNYMRHLSQLFRFYLGEEAVLFTTDGAGLGYLKCGSLQGLYATVDFGPGA
NVTAAFEAQRHVEPRGPLVNSEFYPGWLDHWGEKHSVVPTSAVVKTLNEILEIGANVNLY
MFIGGTNFGYWNGANTPYGPQPTSYDYDSPLTEAGDLTEKYFAIREVIKMYKDVPEGILP
PSTPKFAYGKVQMKKLKTVSETLDVLSFSGPVKTLYPPTFIEMNQAFGFVLYQTVLPVNC
VKPTPLSSPLNGVHDRAYISIDGTAAGILERNKALSINITGKAGSRVDVLVENMGRINYG
KGINDFKGLVFNLTLGADVLVNWTVYSLSVDEAVSKGLLLASGSSSTSSTSTPPPALSPP
TFYTGSFIIPDGIPDLPQDTYIQFPDWRKGQVWINGFNVGRYWPSRGPQITLFVPAHLLS
TSVQNNITVLELEASPCSSGSCMVEFTDTPILNGTVNGQYKRQLFNKQDLF
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgactcccggtgtcggactagtctcggttctgctccttatcataccagccaccacgtac
gccacaactcccactttttctgtggattaccatcgaaactgctttcttaaagatggagag
ccattccgctacatatctggcagtatccactacagccggatccctagagtctattggaaa
gaccggctactcaagatgtacatggctggattgaacgccatccagacatatgtgccgtgg
aacttccacgaagcagttcctggtcagtacgacttcagtggagatcgagatctggagcaa
ttcctccagctctgccaagacatcggcctgctggtcatcatgagaccaggaccctacata
tgtgccgagtgggatatgggtggtttgcctgcctggctgctgaaaaaaaaggatattgtg
cttcgatcatctgatccagattaccttgcagcagtggacaagtggatggggaagctgttg
ccaatcataaagcgttacctgtaccagaatggaggcccaatcattaccgtgcaggtagag
aatgagtacggcagctacttcgcctgtgattttaactacatgcgtcatctgagccagttg
ttccggttttatctcggggaagaggctgtgctgttcactactgatggggcaggtctgggt
tacttgaaatgtggatccctccagggcctctacgccactgttgacttcggcccaggtgca
aatgtaaccgctgcgtttgaagcacagaggcatgttgagccacgtgggcctttggtgaac
tctgagttttaccccggctggttggatcattggggcgaaaaacactcggtggttcctaca
tctgctgtagtcaagactctcaatgaaattctggaaattggagccaatgtcaacctgtat
atgttcatcggtggaactaactttggctattggaatggtgccaacactccttatggtcct
caacccaccagctatgactatgactctcctcttacagaggctggagatctcactgagaaa
tatttcgccataagggaagtcatcaaaatgtataaagatgtaccagaaggaattctgcct
ccatcaacacctaaatttgcatatggaaaagtgcaaatgaagaaactaaagactgtgtca
gagacgttggatgtgttgtctttctccggccctgtaaaaacactttaccctccaacattt
attgaaatgaatcaggcgtttgggttcgtgctttatcaaactgtgctaccagttaactgc
gtgaagcccacgccgctgtcgtcccctctgaatggagtccacgatcgggcatatatttcc
attgatggcactgctgctggtattttggagaggaacaaggcactcagcatcaatataaca
gggaaagctggcagccgtgtggacgtcctggtggagaacatgggcagaatcaactacggc
aaaggaattaatgacttcaagggtctggtgtttaatctgacactcggtgctgatgttctg
gttaactggactgtgtattccctgagtgtcgatgaagcagtcagcaagggtttgctttta
gcttcaggctcctcctccaccagctccaccagcacacctccgcctgctctttcacctcca
accttctacacaggcagcttcatcattcctgacggtatccctgatctccctcaggacacc
tatatccagttccccgactggaggaagggtcaagtgtggataaatggatttaacgttggc
cgctactggccgtcccgtgggccacagatcactctctttgtcccggcgcacctgctcagc
acctccgtccaaaacaacataaccgtcctggagcttgaggcgtctccttgctcctcaggt
tcctgcatggtggagttcactgatactcctattttaaacggcaccgtgaacggccaatac
aagagacaactattcaacaaacaagacctcttttga

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