Danio rerio (zebrafish): 550274
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Entry
550274 CDS
T01004
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03030
DNA replication
dre03410
Base excision repair
dre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
550274 (zgc:110269)
03410 Base excision repair
550274 (zgc:110269)
03450 Non-homologous end-joining
550274 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
550274 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
dre03400
]
550274 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
550274 (zgc:110269)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
550274 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
550274 (zgc:110269)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
550274 (zgc:110269)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
550274 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
550274
NCBI-ProteinID:
NP_001017611
ZFIN:
ZDB-GENE-050417-81
Ensembl:
ENSDARG00000012325
UniProt:
B0UXL7
LinkDB
All DBs
Position
2:18817970..18826816
Genome browser
AA seq
350 aa
AA seq
DB search
MGITKLAHLIHFDAPASMRSKEIGDYSGKIIALDTSIVVNQFRSALPGHLKLSPLAGLFY
RTLAFLEHDIKPVFVLDGKPPHQKRAVLEKRAQSTGWSSSQSPNTGSAFNQECLRLLHLM
GVPCIKAPGEAEALCAHLAKIGTVNAVASEDMDTLAFGGTVLLRQLNAKRDSEITEYSLP
KLLEALQLKYEEFVDLCILLGCDYCDKIGGLGPSRALKLIKEHHTIEGVMEHVNRKTHPI
PLNWQYKDARKLFFETPKIDDPVLAWSEPDEEGLVQFLCKEKPLKEERVRGRMKKFREML
LKRRKQREVNMQMGQTRQSRLEDFFPATRKRRAESAAVKESSGRKQFKIK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggggattacaaaattagcgcatttaattcatttcgacgcaccagcgtcaatgcgcagc
aaagagatcggcgattattctggtaagattatcgcactagatacatctattgtggtgaat
cagttccgttcagctctccctggccatctgaaactaagtcccctcgctggcttgttttac
cgcactcttgctttcctggagcatgacatcaagcctgtctttgtacttgatggaaagcca
ccccatcaaaagagagctgtgctggagaaaagagctcaaagcacaggctggagcagctca
cagagccccaacacagggtctgcctttaatcaagaatgccttcgtctcctgcatctcatg
ggtgtgccttgtatcaaggctccaggtgaagcagaggctctgtgtgcccacctggccaaa
atcggcacagtaaatgctgtggcctcagaggacatggacacactggcatttggaggaact
gttcttctccgccagctgaatgcaaagagagacagtgagatcacagagtactcattacca
aagctactggaagccctacagctaaaatacgaagagtttgtggacctatgtatcttactg
ggttgtgactactgtgataaaattggaggtcttgggccgagtcgagctcttaagcttatt
aaagaacatcatacaatagagggtgtgatggaacatgtcaacagaaagacgcaccctatc
cctttaaactggcagtataaagatgcccgcaagctgtttttcgaaactccaaaaatcgac
gacccagtcctggcctggagtgagcctgatgaagaaggtctggtgcagttcctgtgcaag
gagaaacctttaaaggaagaaagggtgcggggacgcatgaagaagtttcgcgagatgctc
ctaaagagaaggaagcagagggaggtgaatatgcaaatgggccaaactagacaatcacgc
cttgaagattttttccctgccacgaggaagagaagggctgaatctgctgctgtaaaagaa
tcaagtgggagaaaacaattcaaaattaaataa
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