Danio rerio (zebrafish): 550275
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Entry
550275 CDS
T01004
Symbol
ptcd2
Name
(RefSeq) pentatricopeptide repeat-containing protein 2, mitochondrial
KO
K17711
pentatricopeptide repeat domain-containing protein 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dre03029
]
550275 (ptcd2)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
550275 (ptcd2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRP-S27
PPR_2
DUF5817_CT
SMMA_C
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
550275
NCBI-ProteinID:
NP_001017612
ZFIN:
ZDB-GENE-050417-82
Ensembl:
ENSDARG00000035391
UniProt:
Q566X6
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Position
5:complement(35253456..35264517)
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AA seq
381 aa
AA seq
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MALQALNIWTRVILTDASRAAVFRGALQSHCFKCRHGAKRFLLSEDVVKLEEFQQKKLSH
EMSQLKDYRFDIVNQKLEKNEIILKTELKTLLHSCQSAEDVIVARNVIKRYHENNRTTAF
GEFKFGPLFMRLCYELGLEELAATTIKDPALKGFFSDTTSFNITIDMLFNKQLYESGLEV
VGEMKKQGVSLSRDTFMLVFAICYKLNTSRSYHICLTLLEEGQTKGNIIPRRAYCFAIAL
ALKQNDLERAQIFYSHIMSTGTRLCQNLRVFILAVKGSMKEAVYVLKTARISETPVLVRK
PEFSREVVNVLRRKSAGGVWEERVEQVLTQLEKAGQITEITLDDLLCYTPSRKRRLLELP
QKDRQIKQRTRKSLQSGLLLE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaggcactaaacatttggactcgtgttattctgaccgacgcgtccagagca
gcggtgtttcggggagccctgcagtcacactgtttcaagtgtcgacatggagccaagcgc
tttctcttatctgaagatgtggtgaagctggaggagttccagcagaagaaactctcccat
gaaatgtcacaattgaaagattatcgttttgatatagtgaatcagaaactggagaaaaat
gagatcattttaaagactgagctgaaaactctactgcattcatgccagtctgctgaggat
gttattgtggccagaaatgtcattaaaagataccatgaaaataatcgaaccacagcgttt
ggggaattcaagtttggtcctcttttcatgagattatgctatgaactgggtttagaggag
ctggcagccacaactataaaagatccggctctcaaaggatttttttcagacaccacttct
tttaatatcaccattgacatgctgtttaataaacaactctatgaaagtggcttggaggtg
gttggagaaatgaaaaaacaaggagtgtcgctcagcagagacaccttcatgcttgtcttc
gctatttgttataaactgaacacctcaaggtcatatcatatatgtttgaccctgttggaa
gaaggtcagacaaaaggcaacatcatccctcgacgtgcctattgctttgcaattgctctt
gctttaaaacagaatgatctagaaagagcccagatcttctattctcacatcatgagcaca
gggactcggctatgccagaacctgagggttttcatattggctgtaaaagggtccatgaaa
gaggcagtttatgtcctcaaaacagccagaatatcagagactccagtgctggtgaggaaa
ccagagttttctcgagaagtggtaaatgtattaagaagaaagagtgctggtggtgtttgg
gaggagagggtagaacaggtgctgacacagttagaaaaggccggtcagatcacagagata
acacttgatgatttgctgtgttacactccatcaaggaagaggagacttctggagctacca
cagaaagacagacaaatcaaacaaaggactcgtaaatctcttcagtctggactcctgtta
gaatga
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