Danio rerio (zebrafish): 550373
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Entry
550373 CDS
T01004
Symbol
ppie
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase E
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
550373 (ppie)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
550373 (ppie)
03110 Chaperones and folding catalysts [BR:
dre03110
]
550373 (ppie)
Enzymes [BR:
dre01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
550373 (ppie)
Spliceosome [BR:
dre03041
]
Complex B
Other components
Prp19-related factors
550373 (ppie)
Complex C
550373 (ppie)
Chaperones and folding catalysts [BR:
dre03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
550373 (ppie)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
RRM_7
RRM_5
DUF4944
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
550373
NCBI-ProteinID:
NP_001017678
ZFIN:
ZDB-GENE-050417-167
Ensembl:
ENSDARG00000103234
UniProt:
Q561T2
LinkDB
All DBs
Position
17:complement(25296863..25303213)
Genome browser
AA seq
302 aa
AA seq
DB search
MAASKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDS
AAAIDNMNESELFGRTIRVNIAKPMRIKEGSSRPVWSDDDWLKKFSGKKAEESEEAESAA
ESASTETQEGEPPAKKGRTNPQVYMDIKIGNKPAGRLRFLLRADVVPMTAENFRCLCTHE
KGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGRKFEDENFVLKHTHAGQLSMANS
GPNTNGSQFFITVDKTDWLDGKHVVFGELTEGMDVLRAMEAQGTKDGKPKQKVIISNCGE
YV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagcaaacgtgttctttatgttggtggtcttgcagaggaggtggatgagaaa
gtgctgcacgctgcgtttattcctttcggtgacattacagatattcagatcccgttagat
tatgagacagagaaacacagaggctttgcttttatcgagttcgagctggcagaggattca
gcagctgctattgataacatgaacgagtctgagctgtttggcagaaccatcagggtgaac
atcgccaaacccatgagaattaaagagggctcctctcgcccagtgtggtctgacgatgac
tggctgaagaagttctcggggaagaaagcagaggagagtgaagaggccgagtcagctgca
gaatcagcaagtacagagacacaagagggagaacctccagcaaaaaaaggcagaaccaat
cctcaagtctatatggatatcaagattggcaacaaacctgcaggccgactgcgcttcctt
ctgcgagctgatgttgtgcctatgactgcagaaaatttccgttgtttgtgcacacatgag
aaaggctttggattcaagggcagcagcttccaccgaatcatccctcagtttatgtgccag
ggtggagatttcaccaaccacaatggcactggggggaaatccatatatggacgcaagttt
gaagacgagaactttgtcctgaagcacacccatgcaggtcagctttcgatggccaattct
ggtcccaatactaacggttcacagttcttcatcactgttgataagacagactggctggat
ggcaaacatgtggtgttcggagagctcacagagggcatggatgtactccgggccatggag
gctcagggaacaaaagatggcaaacccaaacagaaggtcatcatctccaactgtggagag
tatgtttga
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