Danio rerio (zebrafish): 550520
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Entry
550520 CDS
T01004
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 precursor
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
dre04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
550520 (gabra4)
04082 Neuroactive ligand signaling
550520 (gabra4)
04519 Cadherin signaling
550520 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
550520 (gabra4)
Ion channels [BR:
dre04040
]
Ligand-gated channels
GABA-A
550520 (gabra4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Zip
Motif
Other DBs
NCBI-GeneID:
550520
NCBI-ProteinID:
NP_001017822
ZFIN:
ZDB-GENE-050417-360
Ensembl:
ENSDARG00000013389
UniProt:
Q568M9
A0A8M1N5Q6
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All DBs
Position
14:complement(5142030..5217975)
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AA seq
557 aa
AA seq
DB search
MVSAKKEMVTAMYPTSISTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMRLVNFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQAERAKRKQAKAAA
AASVKSSTGKNKDTEEVLQQNSDTNGNLRKRVNSNIQPQAESKKTQRTEASSKSGASSSK
PTLTSQSSSTSEGTSSFSSQSRLSPSSASQSNAAASSSSASKTTPPAPPSTPTVPDKPSP
GTTPAGSAPLHHLLGPKLENIKKKEAKAQPQPAAPATGGASKIDEYARILFPVSFGAFNM
VYWVVYLSKDTMEAKGA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccacttctatttccactctc
ctctactttctctgtgtggcggcttgcataaagagaatatctggacagatcagaaaggat
gagaaattatacccggaaaatttcacacgcattctggaccgactcctggatggatacgac
aacagactccgacctggatttgggggtccagtgacggaagtgaagacggatatttacgtc
acgagttttggcccagtttctgacgtggagatggagtacaccatggacgtgttcttccgc
cagacgtgggtggatcggcgactgcggtatgaaggccccgtggagatcctccggctgaat
aacctgatggtgaccaaagtctggactcccgacactttcttcagaaacggcaagagatcc
gtggctcacaacatgacggcgcccaacagactcttccgaatcatgaagaacggcaccatc
ctgtacactatgaggttgacaataagtgccgaatgcccgatgcgactggtgaatttcccg
atggacggccactcctgtccgctgaagttcggcagctatgcctacccaaagactgagatg
atctacacgtggactaaaggcccgcagcactcggtggaggtacctcctgaatcctccagt
ctggtccagtatgatctgattggacagactgtgtccagcgagactgtcaaatccatcaca
ggtgaatatgtggtaatgacggtctacttccacttgaaaaggaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgactgtaatcctttcgcaagtgtcgttctggata
aataaggaatccgtgcccgccagaactgtctttggaatcaccaccgtcctcacgatgacc
accctcagcatcagcgctcgccattctctgcccaaggtctcctatgccaccgccatggac
tggtttatagccgtgtgtttcgcgtttgtcttctccgcgctcattgagtttgcggcggtc
aactacttcaccaacgcccaagcagagagagccaagaggaaacaggccaaagctgcggcc
gccgcatccgtcaagagctccacgggcaaaaataaagacacagaggaggtcctgcagcaa
aactcggacaccaacggcaacctgcggaaacgtgtcaactccaacattcagcctcaagca
gagtccaagaaaacccaaagaaccgaagccccaagcaaaagcggcgcatcctcgtccaaa
ccaactctgaccagccaatcatcttccacctcagaaggtaccagcagtttctccagccaa
tcgcgtcttagccccagttccgccagccaatcgaatgcagccgcttcctcctcctctgcc
tcaaagaccacgcctccggctccaccctctacacccacagttcctgacaaaccatcgccc
gggacgacccccgcaggctccgcccctcttcaccacctcctcgggcctaaattagagaat
atcaaaaagaaagaagcaaaggctcaacctcagcctgccgcccctgccactggaggagcc
agcaagatcgacgaatatgcacgcattttattcccagtgtccttcggggcgtttaacatg
gtgtactgggtggtttacttatccaaagacaccatggaggccaagggagcctaa
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