KEGG   Danio rerio (zebrafish): 550542
Entry
550542            CDS       T01004                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04144  Endocytosis
dre04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    550542 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    550542 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    550542 (chmp4c)
   03400 DNA repair and recombination proteins [BR:dre03400]
    550542 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    550542 (chmp4c)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    550542 (chmp4c)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    550542 (chmp4c)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   550542 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   550542 (chmp4c)
SSDB
Motif
Pfam: Snf7 Kinesin_assoc DUF6437
Other DBs
NCBI-GeneID: 550542
NCBI-ProteinID: NP_001017844
ZFIN: ZDB-GENE-050417-389
Ensembl: ENSDARG00000007418
UniProt: Q568Q1
LinkDB
Position
24:complement(11070115..11076303)
AA seq 239 aa
MSKISKMFKVSSSSSSSSRSSSSSGSSSKSKHRSRSGPSPQEAINRLRETEAMLTKKQEY
LESRIEQEIVIAKKNGTKNKRAALQALKRKKRFEQQLTQIDGTLSTIEFQRESLENATTN
TEVLKNMGYAAKAIKGVHEKIDLDKIDSLMQDITEQQEVAQEISDAISKPFGDQFDEDEL
LAELAELEQEDLEESMKSMGRLPSAPTHKLPSTRPSHRATSKKRVEDDHDMKRLASWAS
NT seq 720 nt   +upstreamnt  +downstreamnt
atgagtaaaatttctaaaatgtttaaggtgagctcttcaagctcatccagctcaaggtcc
agttctagctctggatccagttctaaatctaagcaccggtctcggtccggtccatcgccg
caggaggccatcaacagactgagagagacggaggcgatgttaactaaaaaacaggaatac
ctggagagcagaatcgagcaggaaatcgtgatcgccaagaagaatggcaccaaaaacaaa
agagccgcacttcaagctcttaagaggaagaaacgttttgagcagcaactgacccagatt
gatgggaccctgtcaactattgagttccagcgagagtcccttgagaatgccaccacaaac
acagaagtcctaaagaacatgggatacgccgctaaagctatcaaaggcgttcatgagaaa
atagatttggataagattgactccctcatgcaggacattaccgaacaacaggaagtagct
caggagatcagtgatgccatctcaaagcctttcggtgaccagtttgatgaggatgagttg
ttggcagaactggccgagttggaacaggaagacttggaagaaagtatgaagagcatgggc
agattaccaagcgcaccaactcacaaactgcccagcacaagaccaagccacagggcaacc
tcaaagaagagagtggaggatgatcatgatatgaagaggttggcttcctgggcatcataa

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