Danio rerio (zebrafish): 550552 Help Entry 550552            CDS       T01004                                  Symbol atg16l1 Name (RefSeq) autophagy-related protein 16-1   KO K17890   autophagy-related protein 16-1 Organism dre  Danio rerio (zebrafish) Pathway dre04136   Autophagy - other dre04140   Autophagy - animal dre04621   NOD-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:dre00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     550552 (atg16l1)    04136 Autophagy - other     550552 (atg16l1)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     550552 (atg16l1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dre04131]     550552 (atg16l1)    03029 Mitochondrial biogenesis [BR:dre03029]     550552 (atg16l1) Membrane trafficking [BR:dre04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     550552 (atg16l1)  Others   Specific organelles associated proteins    Auto phagosome     550552 (atg16l1) Mitochondrial biogenesis [BR:dre03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     550552 (atg16l1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 ATG16 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR19_1st Ge1_WD40 eIF2A KASH_CCD Beta-prop_SPT8 Beta-prop_DCAF12 HALZ PUMA_CC DUF6212 NET2A Motif Other DBs NCBI-GeneID:  550552 NCBI-ProteinID:  NP_001017854 ZFIN:  ZDB-GENE-050417-401 Ensembl:  ENSDARG00000099430 UniProt:  Q568R2 A0A8M1N5D3 LinkDB All DBs Position 15:45591663..45637461 Genome browser AA seq 606 aa AA seqDB search MAGRRVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQVVFSERLQTEKYEQ QNRHDLSPCVDGGRSDSLQQEMSQMRIRHQEELTELHKKRGELAQSVIELNNQIQQKDKE IQSNEVKMQEYLQQISQLEGECRELRNCLADLERANQTLRDEYDALQITFSALEEKLRKT TEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQAKLQKELADAAKEPLPIDPDDDIEVL TEDAGKATGETSPSRQLSRTPSKRLSQPPPPAGLLDSISNMFGRRRSVNSFSSSPENAEV PSACADVRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGA LTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNA RIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESI VRELELMGRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVT FSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSGAFVASVEKGSKA VLWSDM NT seq 1821 nt NT seq  +upstreamnt  +downstreamnt atggcgggacgcagagtggagtgtttgtggaagcgtcacgttgtggagcagctgaagcag agagacagagtacagcgtcaggcctttgaggagatcatacaccaatataaccggctgttg gagaagtctgatcttcaggttgttttttctgaacgtctccaaactgagaaatatgagcaa cagaacagacacgacctcagtccgtgtgtggacggcgggcgcagtgattctctgcagcag gaaatgtctcagatgcggatcagacatcaggaagagctgacggagctccacaagaaaaga ggagagctggcccagagtgtgattgaattaaacaaccagatccagcagaaagacaaagag atccagagtaacgaagtcaagatgcaggagtatctgcagcagatctcgcagctggaagga gagtgtcgtgagctcaggaactgtctggcggatttggaacgagccaatcagacgctgcga gacgagtacgacgccctgcagatcacgttcagcgctctggaggagaaactgcgcaaaacc accgaggacaatcaggagctggtgacgcgctggatggcggagaaagcccaggaggccaac agactcaatgctgagaacgagaaggactccagacgcaggcaggcaaagctgcagaaggaa ctggcagatgcagcaaaggagccgcttcctatcgacccagatgatgacatcgaggttctc acagaggatgctgggaaggcaacgggtgaaacgtcaccgagcagacagctcagtcgcaca cccagtaaacggttgtctcagccccctcctcccgcaggactgctggactccatctctaat atgtttggaagacgtcgctccgtgaattcgttcagctcgtctcctgaaaacgcagaagtg ccgtcggcgtgtgcggatgtgcgtgttccctccactgcactccacatctttgacgctcat gatggagaagtgaacgctgtgaggtttagtcctggttctcgtctgctcgccacaggagga atggaccgccgggtcaaactctgggaagtcgtatctgggcgatgtgaacctaaaggtgca ctgacgggaagtaatgctggaatcaccagtatagagtttgacagtgcgggctcgtatctt ctggctgcttccaatgatttcgcaagccgaatttggactgtcgatgactacagactgagg cacacgctcacaggacacagcgggaaggttttatctgctcgctttctcctggataacgca aggatcgtttccggcagctacgaccgaacgctcaaactctgggacctgcgcagcaaagtc tgcatgaagacggtgtttgctggttccagctgtaatgatatcgtctgcacggagcagtgt gtgatgagcggacacttcgataagaaagttcgcttctgggacatcagggcagagagtatc gtgcgtgagctggagctgatgggccgtgtgacgtctctggatctgaatcacgaccgcact gaactcctcacctgctctcgggatgacctggtgaaaatcatcgacctgcgcactaatgct gtccgacaaacctttaatgctcaaggcttcaagtgcggttctgacttcaccagggtcacg tttagtcctgacgggagttttgtggcggccggttctgcagacggcgttctgtacctctgg aacgttctgacagggaaactagagaaaaccctcgataagggtcacagttctgctatcaac tcggtgtcctggtctctgtcgggagcgtttgtggccagtgtggagaaaggcagcaaggcc gtgctttggtccgacatgtga

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