Danio rerio (zebrafish): 550598
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Entry
550598 CDS
T01004
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
550598 (capns1a)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C2: calpain family
550598 (capns1a)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
550598
NCBI-ProteinID:
NP_001017899
ZFIN:
ZDB-GENE-030113-3
Ensembl:
ENSDARG00000035329
UniProt:
Q1LYC9
Q568A3
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All DBs
Position
5:37554372..37565244
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AA seq
216 aa
AA seq
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MFLLKKAIGGVIDVIGNIDPNQFVPSEPPPPRRPLAYAVSNESAEEQQFRKVFNQLAGDD
MEVSPTELMNILNKIISKHGDLKTDGFTIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIK
KWQGIYKTYDRDHSGTIGADELPAAFRAAGFPLTDQLFQMIIRRYSDESGNMDFDNYIGC
LVRLDAMCHAFKTLDKDNDGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgctcaagaaagccattgggggtgttattgatgtgatcggcaacatcgacccc
aaccagtttgtgccttcagaacctcctccaccccgcagaccactagcttatgctgtgtcc
aatgagtctgcagaagagcagcagttccgcaaggtcttcaatcagctcgctggcgatgat
atggaagtaagccccactgagctgatgaacatcctcaacaaaatcatctccaaacatggt
gatctgaagacagatggctttaccatcgagtcatgtagaagtatggtggctgtcatggat
agtgacagcacaggtaaactgggcttccatgagtttaaacacctctggaacaacatcaag
aaatggcaggggatttataagacttatgacagggatcattcaggaactattggagcagac
gagcttccagctgccttcagagctgcaggtttcccgctaacagatcaactctttcagatg
attattcgaagatatagcgatgaaagtggaaacatggactttgacaattacatcgggtgc
cttgtcagacttgacgccatgtgccatgccttcaagactcttgacaaagacaatgacggt
acaatcaaggtcaatgttcaggagtggctgcagctgaccatgtactcctga
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