Danio rerio (zebrafish): 552980 Help Entry 552980            CDS       T01004                                  Symbol vclA Name (RefSeq) vinculin A   KO K05700   vinculin Organism dre  Danio rerio (zebrafish) Pathway dre04510   Focal adhesion dre04517   IgSF CAM signaling dre04518   Integrin signaling dre04519   Cadherin signaling dre04520   Adherens junction dre04810   Regulation of actin cytoskeleton dre04820   Cytoskeleton in muscle cells dre05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:dre00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     552980 (vclA)    04518 Integrin signaling     552980 (vclA)    04519 Cadherin signaling     552980 (vclA)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     552980 (vclA)    04520 Adherens junction     552980 (vclA)   09142 Cell motility    04820 Cytoskeleton in muscle cells     552980 (vclA)    04810 Regulation of actin cytoskeleton     552980 (vclA)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     552980 (vclA)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:dre04812]     552980 (vclA)    04147 Exosome [BR:dre04147]     552980 (vclA) Cytoskeleton proteins [BR:dre04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      552980 (vclA) Exosome [BR:dre04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    552980 (vclA) SSDB OrthologParalogGFIT Motif Pfam:  Vinculin Talin_IBS2B TruB_C_2 Mob_Pre Motif Other DBs NCBI-GeneID:  552980 NCBI-ProteinID:  NP_001122153 ZFIN:  ZDB-GENE-050506-61 Ensembl:  ENSDARG00000044968 UniProt:  B3DI32 A0A8M1NHS6 LinkDB All DBs Position 13:complement(28428041..28502194) Genome browser AA seq 1131 aa AA seqDB search MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTSPVAAVQAAVSNLVRVGKE TVQTTEDKIMKRDMPSAFIKVENACAKLVEAAQMLRTDPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVTSMNTVKELLPVLISAIKIFVTTKCTKSHGVEEALKNRNYTFDKMTAE INEIIRVLQLTSWDEDAWANKKDTEAMKRALALIESKMGQAKGWLRDPNALPGDPGEHAL RQILDEAGKVGELCAGKERREILGTAKTLGQMTDQVSDVRARGQGATPMGMQKAQQVAQG LDILVGKVENAARKLEALTNAKQAIAKRIDNAQSWLADPNGGPEGEENIRALLAEAKRIA DLCEDPKERDDILRSIGEIAGLTARLVELRRIGKGDTPEARALAKQIGTALQNLQAKTNR AVANMRPAKAAVTLEGKMEQALRWINNPGVDDHGVGQAAIRGLIAEGRRLASSLPGPYRQ ELLAKCEQVEQLMMQLADLAARGEGESPQARAVAAHLLEAIKDLKAKMQEAMTQEVSDVF SDTTTPIKLLAVAATAPLEAPNREEVFEERASNFENHASRLGATAEKAAAVGTANKSTVE GIQAAVKSARDLTPQVTSAARILLKNPGNQAAYEHFDTMKNQWIDNIEKMTSLVDEAIDT KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPKF RELVKAASDELGRTISPMVMAAKGVAGNIQDPGLQKGFLDSGYRILAAVGKVREAFQPQE LDFPPPPPDLDQLHVNDDQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEMVSEPMM VAARSLHDEARKWSSKPEVPDEGFEAAEAEVDIDDEDEFTDNEDDYEPELLLMSSNQPVN QPILAAAQSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIA KASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEE SEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ NT seq 3396 nt NT seq  +upstreamnt  +downstreamnt atgccagttttccataccaagacgatagagagtatcctggagccggtggctcagcagatt tcacacttggttatcatgcacgaggagggagaagttgatgggaaagcgatcccagatctc accagcccagtggcggcagtgcaagcggctgtcagcaaccttgtgcgggtggggaaggag acagtgcagaccacagaagacaagattatgaagagagacatgccatcagccttcattaag gtggagaacgcctgtgcaaagctggtggaagcagctcagatgctgagaacagacccgtac tctgtcccggcccgtgattacctcatcgacggctctcgtggaatcctctcaggcacctca gacctgctgctgaccttcgatgaagccgaggtgcgtaaaattatccgcgtgtgtaagggc atcctggaatacctgactgttgcagaggttgtggaaaccatggaggacttgatcacttac actaaaaacctgggaccaggcatgacgaagatggcaaagatgattgacgagcggcagcag gaactcacgcaccaggagcaccgcgtaatgttggtcacctccatgaacacagtaaaggag ctgctgcccgtgcttatatcagccattaaaatctttgtgacaaccaagtgcactaagagt cacggtgtggaggaggccttgaagaacagaaactacacgtttgataagatgacagctgaa atcaacgagataatcagagtgctgcagctcacttcatgggacgaggacgcctgggcaaat aaaaaggacactgaggccatgaagagagcgctggcgctgatcgagtctaagatgggtcag gctaaaggctggctgagggaccccaatgcactgccaggagatccaggagagcatgcgctg cgtcagatcctggatgaagcaggaaaagtgggtgagctttgtgcagggaaagagagacga gagatcctgggaacagccaaaaccctgggccagatgacggatcaggtgtcagatgtgcgc gccagaggtcagggtgccacacctatgggtatgcagaaagctcagcaggttgctcaaggt ttggatattctggtgggaaaagtggagaacgcagcccgtaagctggaggccctaaccaat gccaaacaggccatcgccaagagaatcgacaatgcccagagctggctggctgatcctaac ggcggtccagagggtgaagaaaacatccgcgctcttctggcggaagccaaacgcatcgct gacttgtgtgaagaccctaaagaacgagatgacattcttcgttccatcggcgagatcgca ggcctcaccgccaggctggtcgagctccgtagaataggtaaaggcgatactccagaggcg agagctcttgccaaacagattggcacagctttgcagaacttacaggcaaaaacgaaccgt gctgtggccaacatgaggcctgccaaagctgctgttaccctggagggcaaaatggagcag gccttgcgctggatcaacaaccctggagtggacgatcatggagtaggccaggctgctata cgagggctgatagcagagggtcgacggctcgcgagctctctgccagggccgtacagacag gagctgctggccaaatgtgagcaggtggagcagctgatgatgcagctggcggatctggca gcgcggggagaaggagagagtcctcaggcccgcgcagtggctgctcatcttctggaggca attaaagatctgaaggcaaagatgcaggaagcaatgacccaggaagtgtctgatgttttc agcgatacaacaacaccaattaaactcctggctgtggcagcaacagcacctctcgaggcc ccgaacagagaggaggtgtttgaagaaagggcttctaactttgagaatcatgctagcagg ctgggtgctactgcggagaaggcggctgcggtaggaacagccaataaaagcacagttgaa ggcatccaagcggctgtgaaatcagctagagatctaacacctcaggtcacttccgctgca cgtattttgctgaagaaccctggcaaccaggccgcctacgagcactttgataccatgaag aaccagtggattgacaacattgaaaaaatgaccagtcttgtggatgaagccattgacact aaatccctcttggatgcttcagaggaagctattaagaaagacattgataaatgccgtgta gcaatggctaacgttcagccccagatgttggttgcaggggctacaagcattgcccggcgg gcaaacagagtacttctggtggccaagagggaagtggagaattcagaggaccctaaattc agagaactggttaaagcagcttcagatgaactcggtagaaccatctcacccatggttatg gctgctaaaggagtggcaggaaacatccaggatccaggtttgcaaaagggcttcctggac tctggctacaggatcttggctgctgttgggaaagtcagagaagcctttcagcctcaggag ctggactttcctccgccacctccagacctggatcagctgcatgtcaatgatgaccaggct ccacccaaaccacctcttcctgagggagaggttcctccgccgagacctccacctccagaa gagaaagatgaggagttccctgagcagaaggcaggagagatggtgagcgagcccatgatg gtggctgccaggtcactgcacgacgaggcccgcaagtggtccagcaagcccgaggtccca gatgagggttttgaggccgctgaggcggaagtagatatagacgatgaggatgaattcaca gacaacgaggacgattatgagccagagctgctcttaatgtcttccaatcagccagttaac cagcccattctggccgctgcgcagtctttgcaccaggaggctcgcaagtggtccagtaag ggtaatgacatcattggagccgccaagcgtatggccctgctgatggcagagatgtctcgt ctggtgcgtggtggaagtgggaataaacgtgcccttattcagtgcgccaaggacatcgcc aaggcctctgatgaggtcacgcggctggctaaagaagtagccaaacaatgtactgacaaa aggattcgcacaaacctgctgcaggtttgtgagcgcatcccaaccatcagcactcagttg aagatcctttccacagtgaaggccactatgctgggacgtacaaatatcagtgaggaagaa tccgaacaggccactgagatgcttgtgcacaacgcccagaacctcatgcagtctgtgaag gagacggtgagagaagcagaagccgcttccatcaagatccgcacagacgcaggcttcaca cttcgctgggtccgaaaaaccccctggtaccagtaa

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