Danio rerio (zebrafish): 553329
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Entry
553329 CDS
T01004
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1 precursor
KO
K24436
cartilage intermediate layer protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
553329 (cilp)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
553329 (cilp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
Ig_2
I-set
CarbopepD_reg_2
CarboxypepD_reg
ig
TSP_1
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
553329
NCBI-ProteinID:
NP_001186291
ZFIN:
ZDB-GENE-050208-76
Ensembl:
ENSDARG00000053362
UniProt:
A0A8M1NUZ8
LinkDB
All DBs
Position
7:complement(31432142..31441426)
Genome browser
AA seq
1171 aa
AA seq
DB search
MGCLSTWTFLLLLLGITGTISQGTWRGIMGTSWRPNPAVYHNEDNYEWTTWFNVDHPGGK
GDYEKLNVIRYYYRARVCEVPRALEARTTDWIPARSTGERVHADPAVGFWCVNDEQPFGK
NCSNYAVRFLCPRDIVSDVEEGIWGQWSDWSLCPAQCDEEATQHRSRSCQSNSKQCSGKS
VEARSCHGPPCPRCDLQCIVGTVNSECDGCMCQDHTVLGSVRSAGGLPAPGAAILRAGSS
PKLLTVTDHNGHFQVPGICPDGNTTLMVKLSNHAPHQVTVPPSKERTTVLLLRLERAKKL
HVLKNPEDRARREGQTAAFCCKIDGTPGPSSYEWFHNGTLLDRSQYQYDETLVLRNLSLD
HVGEYYCRGSNENGAIKSKPATLTVIGQKEPSCNPRPDSHLIRLPHDCFQNETNSLYFDV
GRCPTTKCTGKLDNGIRCKDSVSYCCGVSNMEEREITCQGYQLPIMVVTQCGCKTCVDTK
AIVRGRAVAADTGEPMRFGHIYMDGVKLSRTGYKGTFSIQVPTNTERLVLTFVDNMQKFV
NTTKVLPFNPRGGAVFHEVKLLRKKPAVIISSRETNTLDLGEVEGQDPVAEIEIPPNAFY
KENGEVFMGNVKASVTFLDPRDVSTAAAAQSDLNFIGDEGDTLPLRTYGMFSVDFRDEEG
GESLNAGEVKVRLDAAQVKMPEHLKTMKLWSLNPETGLWEEEGHFYAEKKQRGKREERTF
LIGNMEIRERRLFNLDVPENRRCYVKVRAFRSERYMPSEQTEGVVMTLINMEPTPGFSTN
PRAWGRFDSVITGPNGACLPAFCDEQKPDAYSAYVMANLGGEELEAVASSPKLNPNTIGV
PQPYLNKLNYRRTDHDDPRIKKTAFSINVAKPRSNVAEEANGPVYAFDKLKECEEASFSA
AHFRFSRVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKLNSPHELNVR
SRNMGGTHPRTVGQLYGIRDTRSIRDMDQATVSAVCLEFKCSGMLYDQDRVDRTLVKVMP
QGSCKRDSVNSMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKE
IALGRCFDGTSDGTSRVMKSNEGVALTFTCGDKEVTRQSMFQQIQNSLGQATAGSARPGR
GNRRQRGSSTAPRSSQRRSTRNSITRSQSLG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcctctcaacatggacctttcttttgcttctactgggaattacaggcaccatt
tctcaaggcacatggagaggtatcatggggacatcatggagaccaaacccagctgtatac
cataatgaagataattatgagtggaccacgtggttcaatgtagatcaccctggtgggaaa
ggagattatgagaagctgaatgtaattcgttattattatcgagcccgtgtgtgtgaggtt
cctcgagctctggaggcacggaccaccgactggatcccagctcgcagcactggggaaaga
gttcatgctgacccagcggtgggcttctggtgtgtcaatgatgaacagccttttgggaag
aactgctcaaactatgctgtacgcttcctctgtcccagagacattgtgtcagatgttgaa
gaaggaatatggggtcagtggtcagattggagtctgtgtcctgctcagtgtgatgaagaa
gcaacacaacatcgctctagaagctgccaatctaattccaaacaatgcagtggaaaaagt
gttgaggccagatcatgccatggtccaccatgcccacgttgtgatttgcaatgcattgtg
gggactgtaaacagtgaatgtgatggctgcatgtgccaggatcataccgttttaggctca
gttcgtagtgctgggggactccctgcacctggagctgcaatcctgcgtgctggttccagc
cccaaactcctcactgttactgatcacaatggacacttccaagtccctggaatctgccct
gatggcaacactactctgatggtcaagctgagtaatcatgctccacaccaagtaactgtg
cccccaagcaaagaacgcaccactgtccttcttttgaggctagaacgagcaaaaaaactc
catgtgctgaaaaatcctgaggatagggccagaagagaaggtcagactgctgcattctgt
tgtaagatcgatggcactcctggaccaagcagttatgaatggttccacaatggtactcta
ctggacaggagtcagtatcagtatgacgagacactagttttgagaaatcttagtttggac
catgttggtgaatactactgcagaggcagcaatgaaaacggagccatcaaatccaaacca
gccaccctcacagttattggtcaaaaagaaccatcatgcaaccctaggcctgattcccat
ttgatccgcttaccacatgactgctttcaaaacgaaacaaactctttatactttgatgtg
ggaagatgcccaacaaccaagtgcacagggaagctggataatggcatcagatgcaaagat
tcagtctcctactgctgtggagtttcaaatatggaggagagagagattacatgtcagggg
tatcaattacccatcatggtggtgacgcagtgtggttgcaaaacatgtgtggacacaaaa
gctatcgttcgtggacgtgccgtcgcagcagatactggggagcccatgaggtttggacac
atctacatggacggtgtaaaattaagtcggactggatacaaaggcacattctcaatccag
gtgccgacaaacacagagcgcctggtcctcacatttgtggacaacatgcagaagtttgtc
aacaccacaaaagtgctaccattcaatcctagagggggagctgtgttccacgaggtcaaa
ctgctgaggaaaaagccagctgtgatcattagctcaagagagactaatacgcttgatctt
ggggaggtggaaggccaggatcctgttgctgagattgagatcccaccaaatgcattctat
aaagagaatggagaagtgttcatgggaaacgtcaaggccagcgtaacttttctagacccc
agggatgtttcaacagcagcggctgcccagagtgatctcaacttcattggtgatgaaggt
gacactttgcccttgagaacctatggaatgttctctgtagactttagggatgaagaagga
ggagagtcactcaatgcaggagaggtaaaagtccgtctcgatgcagcacaggtgaagatg
ccagaacacttaaagaccatgaaattatggtctctaaatcctgaaacaggtttgtgggaa
gaggaaggccatttctatgctgagaagaagcaacgaggcaaaagagaggagaggacattc
ctcataggtaacatggaaattcgtgaaagacggctgtttaacttggatgtacctgaaaac
aggagatgttatgtgaaagtgcgggctttccgaagtgagcgatacatgccaagtgagcaa
actgaaggagtcgtgatgactctaataaatatggagcccacaccagggttttcaaccaac
cctcgggcttggggtagatttgacagtgtcattactggcccaaatggtgcatgccttcca
gccttctgtgatgaacagaaacctgatgcatattcagcctatgtcatggctaaccttggg
ggagaagaactagaggcagtagcgtcctctccaaagttgaatcctaacaccataggtgtc
ccacaaccttatttgaataaactcaactatagacgcacagatcacgatgatcctagaata
aaaaagacagcatttagcattaatgtggccaaacccaggtcgaatgtggctgaggaagcc
aatggtccagtatatgcatttgacaagcttaaggagtgtgaggaagcttcattcagcgca
gctcatttccgtttctcgagagttgaaggtgatcgttatgattacaacacagtgcctttc
aatgaggatgatcctatgagttggactgaagactatttgagttggtggccaaagcccatg
gaatacagggcctgctacattaaagtaaaactcaacagtccccatgagctcaatgttcgg
tctcgaaatatgggaggtacccatccaagaactgttggtcaactttatggcattcgtgac
accagaagcattcgagacatggaccaagcaaccgtttcagcagtgtgtcttgagtttaaa
tgtagcgggatgctctatgatcaagacagagtggatcgcacccttgtgaaggtaatgcct
cagggcagctgcaagagagatagcgtaaacagcatgctacaggaatacttggtgaaccac
cttccactggcggtcaacaatgacacaaatgagttcaccatgcttgcacctctggaccct
ctaggccacaactatggtatctatacagtaactgaccaagaccctaggacagccaaagaa
attgcacttggccgttgctttgatggtacctcagatggcacctcccgagtcatgaaaagc
aatgaaggagtggcattaacattcacctgtggtgataaagaggtcactaggcaaagtatg
ttccagcagatacagaactcactgggtcaggccacagctggaagtgctcggccaggaaga
ggtaaccggagacagagaggaagctcaacagcacctcgcagcagccaaaggaggagtact
cgtaattccatcacacgttcccagagccttggttga
DBGET
integrated database retrieval system
