Danio rerio (zebrafish): 553353
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Entry
553353 CDS
T01004
Symbol
si:ch211-202f3.3
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04141
Protein processing in endoplasmic reticulum
dre04210
Apoptosis
dre04217
Necroptosis
dre04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
553353 (si:ch211-202f3.3)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
553353 (si:ch211-202f3.3)
04217 Necroptosis
553353 (si:ch211-202f3.3)
04218 Cellular senescence
553353 (si:ch211-202f3.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
553353 (si:ch211-202f3.3)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
553353 (si:ch211-202f3.3)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C2: calpain family
553353 (si:ch211-202f3.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
553353
NCBI-ProteinID:
XP_017207337
ZFIN:
ZDB-GENE-080917-19
Ensembl:
ENSDARG00000052917
UniProt:
A0A8M6Z1T3
LinkDB
All DBs
Position
17:45567665..45599191
Genome browser
AA seq
846 aa
AA seq
DB search
MSLDYVGKPEHLEEAHAITTGKLNLGAHPGSVAVDFDIAGNSSSSDFFKPTANNFSSMND
GGTGSMQSALSDLSSISTAPKTFGISELDASTINTLTSGVFWCGAGLLPAFLKPEVGQKS
AKASHRQRRRRLLWVKFLNLAFKDFKMPPPVVPHGMCLKVMNDRNMKGGMGSDTNPLKFM
DQDYNFLQDYCLKTRQRFVDEFFPPDLRSIGEGLLKPEVMARVEWIRPTKLYPEAAEFVV
DTVSRFDYAQGFIGNCWFLASVGALTFQSKLLQKVVPDGQSLRHNYTGLFHFRFWRFGKW
FDVVIDDKLPTINRQLIFVKSKTYNEFWPALLEKAYAKVCGSYADMHTGRVSEALLDFTG
GVHMHYDLKTAPTDLWEIMYRASQSEVLMGCESPAGNEERLPNGIVLGHAYTVTKVYQVM
SGRNPVQLVRLFNPWGDSEWNGDWSDNSPLWNTVDDEDRKQLLVSDNGEFWMSMKDFLRT
FDNMDICCNCPDFLEGKSACKWTSKSHNGSWVPGSTAGGCMNHPDTFCTNPQFWLRINEM
DKTCDQGQNNVLVSLIQKPDKRNRRLAQHHGIGFCVFAVPPEMRSEGKFRSSFFNRKPVV
TSGNFQDARQVMKFFRLEPGEYLIVPSTYLPNKNADFILSILCKNDIQIQKDTERTEKDF
LVDLIGVSESGCTEKEDEESKTKFLFRQYSDQYKVVDAEKLQQILHENLLRGRKNAEGFG
LDSCRSMIAMSDFCVTGRLQGSEFVRLWDRITTYRDIFYNMDSSKDGVLSLNELQNALEK
TGLHLNEDILNLMVVRYGGASEQISLEGFICLVMRLNCMASIFQKLCENGKISLDESEWI
GLTMYS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggactatgtggggaaaccagagcaccttgaagaagcccacgcaatcacgaca
gggaagttgaacttgggggctcatccgggatctgtagcagttgactttgatattgctggc
aatagttcaagctctgacttcttcaaaccgactgccaacaacttttcatccatgaatgac
ggtggaacgggatccatgcaatcagctctgtcagatttgagttccatctccacagctccc
aaaactttcggtatctccgaactagatgcatcaaccataaacacactcacttccggtgtg
ttttggtgtggggcggggcttctgcctgcatttttaaagcctgaagtggggcaaaagagt
gcaaaagccagtcatagacagagaagacgacgactcctttgggtgaaatttctcaacctt
gcatttaaagattttaaaatgcctcctccagtggttcctcatggcatgtgcctgaaggtt
atgaatgaccgtaacatgaagggcggcatgggctctgacacaaatccactgaagttcatg
gaccaagactacaacttcctgcaagactactgtctcaagacaaggcagagatttgttgat
gagtttttcccaccagaccttcgttccattggcgaagggctgctgaagcctgaggtcatg
gcccgagtggagtggattagaccaacgaaattatatccagaagctgctgaattcgttgta
gatacggtgtccaggtttgactatgcccaagggtttataggaaactgttggtttctggcc
tctgttggtgccttaacatttcaaagcaaattactgcaaaaggttgttccagatggacag
tcactcagacacaattacactggcttatttcacttcaggttctggcgctttggaaaatgg
ttcgatgtagtgattgacgacaagctgccaacaatcaatcgccagctgatctttgtcaaa
tctaaaacatataatgagttctggccagccttgctggagaaagcatatgccaaggtatgt
ggctcctatgctgacatgcacaccggccgagtgtctgaggccctgctggacttcactggc
ggggttcatatgcactacgatctgaaaacggctccgactgatctgtgggagataatgtac
cgtgcttcccagtcagaggtccttatgggctgtgaaagcccagcagggaatgaggagcgg
ttaccaaatggcatagttctgggccacgcttacactgtgacaaaggtctaccaggtcatg
agtggtagaaatcctgttcagctggtgagattgttcaacccatggggagacagtgagtgg
aatggagactggagtgacaattcacctttatggaacacggtcgatgatgaggaccgcaaa
cagcttctcgtatctgataatggagagttctggatgtcaatgaaagatttccttagaaca
tttgacaacatggacatctgttgtaactgtcctgattttctggaaggaaagtctgcatgc
aagtggacctccaagtcccacaacggcagctgggttcctggaagtacagctggaggctgc
atgaaccacccagacaccttctgcaccaacccccagttctggctgagaattaatgagatg
gacaagacgtgtgaccaaggccaaaacaatgttctggtgtccctcatacagaaacctgac
aagaggaacagacgtctggctcaacaccacggaattggcttctgcgtgtttgcggttcca
ccagagatgagatctgagggaaagttcagatcaagcttttttaatagaaagcctgtggtg
acaagtgggaactttcaggacgcaagacaggtgatgaagttcttcaggctggaaccagga
gagtatctcattgtaccgtccacttacttgcctaataagaacgcagatttcattctgtcc
atcctctgcaagaatgacatccagatacaaaaggacacagaaagaacagagaaagatttt
cttgtggatcttattggagtgtctgagtctggttgcacagaaaaggaggatgaagagtca
aaaacaaaatttctgtttcgacagtattctgatcagtacaaagttgtggatgctgagaaa
ctccagcagattcttcatgaaaatctgcttagagggagaaaaaatgctgaaggatttggg
ctggattcctgtagaagtatgattgccatgtcagatttttgtgtcactggaagacttcag
ggatcagaatttgttcgtctgtgggaccggattacaacctacagggacatcttctacaac
atggactcttctaaagatggtgttctgtctttgaatgaacttcaaaatgcattagagaaa
acaggcctacatctaaacgaagacatcttgaatctcatggtggtgcggtacggtggtgca
tctgaacagatctcgttggagggattcatatgccttgtcatgcgtttgaactgcatggcc
agcatatttcagaaactctgtgaaaatgggaagataagtcttgatgagagtgagtggata
ggactcaccatgtactcatga
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