Danio rerio (zebrafish): 553360
Help
Entry
553360 CDS
T01004
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
553360 (pcif1)
Protein phosphatases and associated proteins [BR:
dre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
553360 (pcif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
553360
NCBI-ProteinID:
NP_001410701
ZFIN:
ZDB-GENE-120920-2
Ensembl:
ENSDARG00000099084
UniProt:
A0A0R4IKJ1
A0AB13AB81
Structure
PDB
PDBj
LinkDB
All DBs
Position
6:complement(55324242..55352678)
Genome browser
AA seq
721 aa
AA seq
DB search
MTSENHTTIKADSALVMSPTGSTSQAAPFSPSTSKPIQELPDELIQAGWSKCWSKRENRP
YYFNRFTNQSLWEMPVLGQHDVISDPLGLNAAPASGEANADAGLGNGQRKRHPSEDASQA
GPNSFKRPKVEIPATPTTPTVPISPSTPGVKPWVNTTTDEKQGQASTPAPAPYRPSVVYW
DLDIQTNAVIRERAPADHLPPHPEIELQRAQLTTKLRQHYHELCSQREGIEPPRESFNRW
LLERKVVDKGLDPLLPSECDPVISPSMFREIMNDIPIRLSRIKYKEEARKLLFKYAEAAK
KMIDSRNATPESRKVVKWNVEDTMNWLRRDHSASKEDYMDRLEHLRKQCGPHVASVAKDS
VEGICSKIYHISAEYVRRIRQAHLTLLKECNISVDGTESAEVQDRLVYCYPVRLSIPAPP
QTRVELHFENDIACLRFKGEMVKVSRGHFNKLELLYRYSCIDDPRFEKFLSRVWCLIKRY
QVMFGSGVNEGSGLQGSLPVPVFEALNKQFGVTFECFASPLNCYFKQFCSAFPDIDGFFG
SRGPFLSFSPASGSFEANPPFCEELMDAMVTHFEDLLGRSSEPLSFIIFVPEWRDPPTPA
LTRMEASRFRRHQMTVPAFEHEYRSGSQHICKREEIYYKAIHGTAVIFLQNNAGFAKWEP
TTERIQELLAAYKVSGRSLPSPGPSSTNTGEKDSKPAPERTAPSQDNSSPVDKTAQDTTN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaaaaccacacaacaattaaggcagactcggcattggtcatgtcgcccacc
gggtccacgtcacaggcggctccgttctcaccctcgaccagcaaacccatccaagagctg
ccagatgagctgatccaggctggatggtcaaaatgttggagtaaaagggagaaccggccg
tattacttcaatcgattcactaaccagtcgctgtgggagatgcctgtcctgggacagcat
gatgtcatttcagatcctctgggattgaatgcagctccagcctctggtgaggcgaatgct
gatgcaggtctgggaaacgggcagcgtaaaagacatccatcagaggatgcttctcaagca
ggccctaacagcttcaagaggccaaaggttgagattccagccactccaacaactcccact
gtccccatttctcccagtacaccaggagtaaaaccttgggttaacaccaccacagatgag
aaacaaggccaggccagtacgcctgcacctgcaccgtaccggccctctgtagtgtactgg
gacctggacattcagaccaacgctgtgattcgagagcgagccccagcggaccaccttcct
ccacatcctgagatcgagttgcagagagctcaactcaccaccaaactccggcagcactac
catgagctgtgctctcagcgggagggcatcgagcccccacgggaatccttcaaccgctgg
cttctggagaggaaagtagtggataaaggtctggatcctctcctgcccagtgaatgtgac
ccagtcatctctccgtccatgtttagagagatcatgaatgatatccccatcaggctctct
cgcatcaaatataaagaagaggccagaaaactcctgttcaaatatgcagaggcggccaag
aaaatgatcgactccagaaatgcaactccggagagtcgaaaggtggtgaagtggaacgta
gaggacacgatgaactggctgagacgagaccattctgccagcaaggaggactacatggat
cgacttgagcatttacggaagcagtgcggccctcatgtggcatcggtggcaaaggactct
gtcgaaggcatctgttcaaaaatctatcacatttctgcagaatatgtgcgcaggattcga
caagctcacctcactctactgaaagagtgcaacatttctgtggacggcacagagtcagcg
gaggtccaggaccgcttggtttattgttatcctgtgagactgtccatcccagctcctcct
caaactcgtgttgagctgcactttgagaacgacatcgcttgtcttcggtttaaaggagaa
atggtgaaggtcagccgcggtcatttcaacaaactggaacttctctatcgatacagctgt
attgacgacccaaggtttgaaaagttcctttcacgcgtgtggtgccttatcaaaagatac
caggtaatgtttggctctggtgtgaacgaggggtctggtctacaggggtctcttcctgtt
cccgtctttgaggcgctcaataaacagttcggagtgacgttcgagtgtttcgcttctcct
ctaaactgctattttaagcagttctgctcggcttttccagacattgatggcttctttggc
tctcgagggccatttctcagcttttctccagccagtggctctttcgaggcgaaccctcct
ttctgtgaggagctcatggatgccatggtgacacactttgaggatctcctgggccgctcc
agtgagcctctgtccttcatcatctttgtgccggagtggcgtgacccgccgactcctgct
ctgacgcggatggaggccagtcgcttccgcaggcaccagatgacagttcccgccttcgag
cacgagtaccgcagcggctctcagcatatctgcaaaagagaagagatttactacaaggcc
atccacgggacggctgtcattttcctccaaaacaatgctggctttgccaaatgggagccc
acaacggagagaatccaggagctcctggcagcatacaaagtgtccgggcgttcgctgccc
tcacccggtccatcttccactaatacaggagaaaaagactccaaaccagccccggagcgc
acagctcctagtcaagacaacagcagtcctgtggacaagactgcacaggacacaacaaac
acttag
DBGET
integrated database retrieval system
