Danio rerio (zebrafish): 553374
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Entry
553374 CDS
T01004
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
553374 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
553374 (rab11fip1a)
Membrane trafficking [BR:
dre04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
553374 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Erf4
Motif
Other DBs
NCBI-GeneID:
553374
NCBI-ProteinID:
XP_003199162
ZFIN:
ZDB-GENE-051113-116
UniProt:
A0A8M1RF48
LinkDB
All DBs
Position
8:complement(37987165..38022300)
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AA seq
1187 aa
AA seq
DB search
MSLGDQQWYPTSVQVTVLKARNLRIKGKNGTNDAYAIMQVGKDKFSTSVAEKCVSPEWKE
EATFDLPLVHQGDVERCTLYIIAMHRALVGLDKFLGQAVINLVDLHANRSRKKTDWYKLV
DKHGKQEKDRGEVMLDIQFMRNNMTASMFDLSMTEKPRSGIAKLKDKIRGKKKDGLSDSA
SAIVPSSMETDSEGEGEGSSDSPKKKSKLKSLFGPKTNLQRNVSQSMSTLGTLPEKNSSL
SSSRSSGLNVDSPDVKKKFKILGHKRTDSSDSKVSLGPFSLLSRSKQNIQEQNNLCINGS
HVYAEDQEPKASFGSTLSLNSSGKGSAEDVRKFHQRNISDVSIDSFKGLSIPSYKPEVQD
KTVPQRPLEDKNSQPVKVLEEEKEKKPEGRSLQEMLDRQEEQEQWRQQERERKQEEERKE
QERKRREEEELQRKRREEETQHAEEQRHQEESRVTERLSSLFGIGKKKEEKKEGSGSPAM
NEPKHLNVSSSTNPFEDIPLTPDTSASLPEERSTDPRRGIRGIAPTPPASAFPSRTAKVS
AVKPRLALNVLPETHNSLSQSPSNFVNKQSTIHASPVSSSLSTDPFESLGMFSDLHSSLA
PPKPPRSFSESIESNMENLSAPKSEKRQAPLPPGYIGGSSSARNGRQDSKNTQRPPLPLP
DYETLFPKKRHGVMSQTRWDHIIAEVNQRNWDFSEEMNVDGPNKSLSNSSAVLKDRTSAN
LNQLQRNHEPLPPVLTRPKEALKPPKVHETSEPTLKTTVQHDNFNESVYATVNKPGKSKN
FENNPHPAVQHLPQDMERKTPDGITYQPSHSIDKPTPASRVKQNINPKTEDVAKQMPSAK
PRQQSLVKDPVRQVEPDQHVTTQPVTSENNKAEKSEKGQKGSVFTSKSHLRTSEVPENLG
KLSKDPDGSGMINTFPGDNVGTEDPWAFIPQQTTDEEDVLFTKGPTQLKSIEDQELSYNK
NLAKKDNSMAPKSESEKQAPSFTEQARATFQRNFSLRKKNPSHLYTTPGKAGTESSSLDR
SISQSSQDAEDVEMTVTSIASSSRTESTPETSQTPTGGKTALRAWVSPSESQTYTLQSGS
GNAVSSSKRPHPVKPMSTTENQSPSVLAVGKEPKTITIKEMAKSKNCEGSPYTQLTQEEL
ITLVVKQQGELSSKDSRILELEEYIDNLLLRVIEEKPEILLTLHSKC
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgggtgaccagcagtggtatcccaccagcgttcaggtaaccgtgctcaaagca
cgaaacttacgtatcaagggcaaaaatggaacgaacgacgcctatgccatcatgcaggtg
ggcaaggacaagttttccacctcggtagcggagaaatgcgtctcaccggaatggaaggag
gaagcgacgttcgacttgccgctggtacatcagggggacgtggaacgatgcacgctgtac
atcatcgccatgcaccgtgccctggtggggctagacaagtttttggggcaggctgtcatc
aatttagtggacctccacgccaacagatcacgcaagaaaaccgactggtacaagctggtg
gataagcatgggaagcaagagaaggaccgtggggaagttatgctggacattcagttcatg
aggaataacatgacagccagcatgtttgacctctccatgacagagaagcctcgctctgga
atcgctaagctcaaggataaaattcgtggaaagaagaaagacggcctgtcagattctgct
tctgcgattgtgccctcatcaatggaaacagacagcgaaggagaaggagagggcagttca
gactctccaaagaagaaatcaaagctgaaatccctgtttgggccaaaaactaacctccaa
aggaatgtgtctcagtccatgtcaaccctcggcaccctacctgagaagaacagttcactt
agcagcagcagatcatcaggccttaatgtggattctcctgatgtgaaaaagaagtttaaa
attctgggacacaagcgcactgacagctcggatagcaaagtgtcacttggccctttttct
cttctgagtcgctctaaacagaacatccaggagcagaataacctctgtatcaacggcagc
catgtttatgcagaggatcaagaacccaaagccagctttggctccacgctcagcctgaac
agctccggaaagggttcggcagaggatgttcgtaaattccatcaacggaatatttctgac
gtctccatcgactcatttaaaggcctaagtattccctcgtacaagcctgaagtgcaagac
aaaactgtcccacagcgccctctggaggacaaaaactcgcaacctgtgaaggtgctggag
gaggagaaggaaaagaaacccgaaggaagaagccttcaagagatgctggaccggcaggag
gagcaagagcaatggaggcagcaggaacgagagaggaagcaggaggaagagaggaaagaa
caagagaggaagcgcagagaagaagaagagctgcagaggaagagacgtgaagaggagact
cagcatgccgaggagcagcggcaccaggaggagagcagagtaactgagcggctctcctcg
ctcttcggcattggaaagaaaaaggaagagaagaaagagggatctggttctccagctatg
aatgaacccaaacatctgaatgtgtcctcctccacaaacccctttgaagacattcccctc
accccagatacttcagcttctttgccagaagagagatccacagacccccggagaggcatc
aggggaattgccccaacaccacccgctagtgctttccctagccgaacagcaaaagtgtcc
gctgtcaagccaagattggctctgaatgtactgcctgaaacgcataatagcctgtcccaa
tccccctcaaactttgtaaacaagcagagcactatccacgcttctccagtttcctcatcc
ctttctactgatccatttgagtctcttggtatgttttctgatcttcattcttctctggca
ccccctaaacctccgagaagtttcagcgagtcaattgaatccaatatggaaaacctctcc
gctcccaaatctgagaagcgacaggctcctcttcccccaggttatattgggggctcatcc
agtgctagaaacgggagacaggactctaaaaatactcaaaggcctcctcttcctcttcct
gactatgaaacactttttcccaagaagaggcatggggtgatgagtcaaacacgttgggac
catattatcgcagaggtaaaccagagaaactgggatttctcggaagagatgaacgtagat
ggaccaaacaaatcattgtcgaattcatctgcagttttgaaggacagaacctcagccaac
cttaaccagcttcaaagaaatcatgagcctcttccacctgtccttacaaggcccaaagaa
gccctcaagccaccaaaggttcatgaaacatcagaaccaacgcttaagaccactgtccaa
catgacaatttcaatgagtctgtatatgctactgttaataaacctggaaaatcaaagaac
tttgaaaacaacccacatccagctgtccaacatttacctcaggatatggaaaggaagact
cctgatggcattacctatcaaccctcccattcaatagataagcctacaccagcctccagg
gtcaaacaaaatataaatccaaagactgaagatgtggctaaacagatgccttcagccaaa
ccccgacaacagtcattagtcaaggacccagtcagacaggttgaaccagaccagcatgtg
acaactcagcctgtgacttcagaaaataacaaagctgagaaatcagagaagggccaaaag
ggaagtgtttttacaagtaagtcccaccttagaacttcagaagttccagaaaatttggga
aaactttctaaggatcctgatggaagtggaatgatcaacacattcccaggtgataatgta
ggtactgaagatccttgggcttttataccacagcaaaccacagatgaggaggatgtgctc
ttcactaaaggcccaacgcaattgaaaagtattgaagatcaagagttatcctacaataaa
aacctagcaaaaaaagataacagcatggcaccaaaatcggagtctgaaaaacaagctcca
agctttactgaacaagctagagccacatttcaaagaaatttttccctaagaaagaaaaat
ccatctcatctttacacaacccctgggaaagctggtactgagagtagtagtttggataga
tcaatttctcaatcttcgcaagatgctgaagatgttgagatgacagtaactagtattgct
tcatcaagcagaactgagtccacgccagaaacatctcaaactccaactggcggcaagact
gcactccgtgcttgggtctcaccttcagaatctcagacatatactttgcagagtggtagt
ggaaatgcagtttctagttcaaaaaggccacatccagtgaaacctatgagcacaacagag
aaccagagtcccagtgttcttgctgtggggaaagaaccaaagactatcaccatcaaggaa
atggctaagtcaaaaaattgcgagggcagtccatacacccagctcacacaggaggagctc
atcacactggtagtaaagcaacagggcgaattatccagtaaagattccaggatcctagag
ttagaagagtacatcgataacctgctactccgtgtcatcgaggagaaaccggaaatcctg
cttacactacattccaaatgttag
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