Danio rerio (zebrafish): 553383
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Entry
553383 CDS
T01004
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04210
Apoptosis
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
553383 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
553383 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
553383 (sptan1)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
553383 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
553383 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
Motif
Other DBs
NCBI-GeneID:
553383
NCBI-ProteinID:
NP_001091958
ZFIN:
ZDB-GENE-051113-60
Ensembl:
ENSDARG00000019231
UniProt:
A3FG33
LinkDB
All DBs
Position
21:14524033..14591625
Genome browser
AA seq
2480 aa
AA seq
DB search
MDISGVKVLETADDIQERRQQVLDRYRRFKELSVVRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAEAIIKLDETGNLMISEGHFASETI
RTRLEELHRLWDLLLQKTKEKGIRLLQAQKLVQYLRECEDALDWISDKEAIVTSEELGQD
LEHVEVLRKKFEEFQTDLAAHEERVNEVNQAAGKLTQENHPEAELILKKQEEVNSAWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALNDKVNTLGGEADRLQQTHPQNATQIHLKRDELITNWEQIQTLATERHARLNDS
YMLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKST
DEAGQALLNTGHYASEEVKEKLGILSEEKVSLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KDDVATRRDALLSRRNALHERAQFRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELVDGKHYASSEVSTRMDEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDFGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDADNIRKKQEALVARYEALKEPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVTQKGEAMIDEGHFAGEDVKAKLQELHNRWDGLKGKAAQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEEAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEQGSIGLRQDQIENQTAATKEVCSVSMRMKQVEELYGTLLELG
EKRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEVGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVASELESEGLMAEEAPVVQAQQVEVLGSAPGKDEADSKGASPWKSVRL
AVQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALN
TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTEL
NTAWSSLVGRADQRKEKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEAL
LERHQEHRTEIDARAGTFLAFEQFGQQLLARGHYASPEIKQKLEALDRERADLEKAWVQR
RMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQ
EEKIAALQSFADQLISADHYAKPEIFKRRSEVLDRWLRLKAQMIEKRSKLGESQTLQQFS
RDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDT
GNALIQRGACAGSEDAVKARLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDF
WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDT
SQVKDKRDAVNGRFGKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDY
GRDLTGVQNLRKKHKRLEAELGAHEPAIQSVLETGKKLSDDNTIGQEEIQQRLAQFVEHW
RELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKH
EAFETDFTVHRDRVNDVCSNGDELVKKENHNVENIMAKMKALRGKVLELERAAAQRKAKL
DENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEG
ITNITALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQDHFRKVEDL
FLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHDAFRSSLSSAEADFSQLAE
LDRQIKSYNVVSNPYTWFTMEALEETWSNLQKIIKERELELQKEQRRQEENDKLRQEFAQ
HANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAM
EEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMF
KHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDIVDPNRDGNVSLQEYM
AFMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLTKEQADYCISHMKPYLDSK
GREIPSAFDFVEFTRSLFVN
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagtggagtcaaggttttagagacggcagatgacatccaagagcgccgacag
caggttctggaccggtaccgtcgcttcaaggagctgtctgtggtgcgcagacagaaactc
gaagactcttaccggttccagttcttccgtcgggatgcagatgaacttgagaaatggatc
caagagaagctacagattgcctctgatgagaactacaaggaccccagtaacctgcaggga
aagctccagaaacatcaagcgtttgaagcagaggtgcaggctaacgccgaggccatcatc
aaactggacgagaccggcaacctcatgatatccgagggccactttgcatctgaaaccatc
cgcacccgtctagaggagcttcaccgtctgtgggacttgctgctgcaaaagactaaagag
aagggaatccgtctcctgcaggcccaaaaactggttcagtacctccgtgagtgtgaggat
gccctagactggatcagtgacaaggaagctattgtcacctcagaggagcttgggcaggac
ctggaacatgtggaggtcttgcagaagaagtttgaagagttccagaccgatctggcagcc
catgaagagcgtgtgaatgaggtgaaccaggcagccggcaaactaacccaggagaaccac
ccagaagctgagctcatcctgaaaaagcaggaggaggtgaactccgcctggcagaggctg
aagggcttggctcagcagaggcagggcaagctgtttggagctgctgaagtgcagcgtttc
aaccgggatgtggatgagacaatcagctggattaaggagaaggagcagttgatggcatct
gatgattttggtcgtgacctcgccagcgttcaagctttgctccggaaacacgaagggctg
gaaagagatttggcagctttgaatgacaaggtaaacactcttggtggcgaggcggaccgt
ctgcagcaaacacacccccagaatgccactcaaatccacctgaagagagatgaactcatt
accaactgggagcagatccaaaccctggcgactgagcgacatgctcgacttaatgactcc
tacatgctgcagcgcttcactgcagatttccgcgacttgacgagctgggtgaccgagatg
aaggctttgatcaatgcagatgaactggccaacgatgtggctggagcggaggccctgctt
gatcgccaccaggagcacaagggtgagatcgacgctcatgaggacagtttcaaatctact
gatgaggccggtcaggcactgcttaacactggacattatgcttctgaggaagtcaaagaa
aaactgggcatcttgtctgaggagaaagtgtctcttctggagctgtgggagctccgcagg
cagcaatacgagcagtgcatggacctgcagctcttttacagggacactgagcaggttgac
aactggatgagcaagcaggaggctttcctgctgaatgaagatctgggcgattctctggac
agtgttgaggctcttctaaagaaacacgaagactttgagaaatccctcagtgctcaggaa
gaaaagatcactgcgctggatgaatttgccaccaaactgatccagaacaatcactacgcc
aaggatgatgtggccacccgcagagatgcactgctgagcagacgcaacgctcttcatgag
cgggctcagtttcgccgcgctgccctggaggactccttccatctgcagcagttcttccga
gactctgatgagctcaagagctggattaacgagaagatgaagaccgccactgatgaggcc
tacaaggatccatccaacctgcagggaaaggtccagaagcaccaggccttcgaggctgag
ctttctgccaatcagagccgcattgatgcactgcagaagtcaggccaggagctggtggat
gggaaacattatgcctccagcgaggtgtccacccgaatggatgaagtcagctctcaatgg
aagaagcttctggaggcaactgagctcaaagggattaagttgcgtgaagcgaaccagcag
cagcagttcaatcgcaatgtggaggacatcgagctttggctgtatgaggtggagggacat
ctggcctctgatgactttggcaaagacctgaccagcgtccagaatctccagaagaaacat
gctcttctagaagctgacgtggccgctcaccaggaccgtattgatggcattaccatccag
gccaggcagttccaagatgccggccattttgatgctgataacatccggaaaaaacaagag
gctctagtggcacgttatgaggccctgaaggagcccatggctgcccgcaaacagaagctg
tccgactctctgcgccttcagcaactttttagggatgtagaagatgaggagacctggatc
agagagaaggaacccattgcttcctccaccaacagaggaaaagaccttattggggtccaa
aaccttctgaagaaacaccaggctctgcaggcagaaatctctggccacgaaccccgaatc
aaggctgttactcagaagggggaggccatgattgatgaaggtcactttgcaggggaggat
gtgaaggctaaactacaagagctgcacaaccgctgggacgggctgaaaggaaaagcagcc
cagcgtagacaggatctggaggactctctccaggctcagcagtactttgctgatgccaac
gaggccgagtcctggatgagggagaaggagcccattgtaggaagccctgactacggcaaa
gatgaggactctgctgaggctttgctgaagaagcatgaggctctgatgtctgatttgagt
gcatatggcagcagcatccaggccttgaaagaagaagctcaggcctgcagacaacaagtg
gcccccactgatgacgagactggcaaggagctggttctggctctgtacgactaccaggag
aagagtccacgtgaggtcaccatgaagaagggagacatcctcactctgctcaacagcacc
aacaaggactggtggaaagtggaagtgaacgacaggcagggctttgttcccgcagcgtac
gtgaaaaagttggacccgactcaatcttcctctcgtgaaaatctgctggacgaacagggc
agcatcggtttgcgacaggatcagattgagaaccagactgcggccaccaaggaggtgtgc
agcgtgtctatgcgcatgaagcaggtggaggaactgtatggtacactgctagagttggga
gagaagaggaaggacatgctggagaagagctgcaagaagttcatgcttttccgtgaggcg
aacgagctgcagcagtggatcaatgagaaagagtctgcgcttactaacgaggaggtggga
tctgacctggagcaggtggaagtgctgcagaagaagtttgatgacttccagaaggatctg
aaagcaaatgagtctcggctgagggacataaacaaggtggcgtctgagctggagtctgaa
ggtctgatggcagaagaggctcctgtggttcaggcccagcaagtagaggtgctgggctca
gctcctggcaaggatgaagcagactccaaaggtgcatctccatggaagtctgttcgcttg
gctgttcaaacaacggccaactttaatactatcaaggagctgaacaaccgctggaggtct
ctgcagcagctggctgaagaccgaagcaacatgctgggcagtgctcacgaagttcagagg
ttccacagagatgcagatgagaccaaggagtggatcgaagagaagaaccaagccctgaac
actgataactatggccatgacctcgccagcgtgcaggctctgcagcgcaagcatgaagga
tttgagagagatctagccgctttaggagacaaggtgaattctcttggtgagactgcagag
cgtctgattcaatctcatcctgaggctgtggatgacatccaggagaagtgcaccgagcta
aacacagcatggagcagcctggtgggtcgtgcagaccagcgcaaagaaaaactgggcaac
tcccatgacctgcagcgcttcctcagtgacttcagagatctcatgtcttggatcaatgga
atcaggggacttgtgtcttccgatgagctggccaaggatgttactggtgctgaagccctg
ttggagagacatcaggaacaccgcactgagatcgacgctcgtgcaggaaccttcctggct
tttgagcagtttggacagcagctgctcgctcgtgggcattacgcaagccctgagatcaaa
cagaagctggaggctcttgaccgggagcgtgctgacctggagaaggcctgggttcagcgc
aggatgatgctggaccagtgcctggagctgcagttgtttaaccgtgactgtgagcaggct
gagaactggatggctgcccgcgaagccttcttagccagcgatgacaagggagattctctg
gacagtgtggaggcgctcattaagaaacacgaggactttgataaggctatcaatgtgcag
gaagaaaagattgctgcactgcagtcttttgctgaccagctcatcagcgctgaccactat
gccaagcctgagatcttcaaacgacgcagtgaggtcttggacaggtggctccgcctcaag
gctcagatgattgagaaacgctccaagcttggcgagtcacagactctacagcagttcagc
agagacgttgacgagatcgaagcttggatcagtgagaaactccagaccgccacagacgag
tcttacaaagaccccaccaacatccagctgtccaagctgctgagcaaacaccagaaacac
caggcttttgaggctgagctacacgctaacgctgatcgtatccgcggagtgattgacacg
ggcaatgctctcatccagagaggtgcctgtgctggaagtgaagatgctgttaaggctcgt
ctgaatgctctggacgagcagtggcagttcctggtcaacaagtctgctgagaagagtcag
aaactgaaggaggccaacaaacagcagaacttcaacactggcatcaaggactttgacttc
tggttgtctgaggttgaggctcttcttgcctctgaggattatgggaaagatctggcttca
gtcaacaatctgctgaagaagcaccagctgttggaggctgatatctctgctcatgaggat
cgtttgaaggatcttaatggccaggctgacagtctgatggccagcaacgctttcgacaca
tctcaggtcaaagacaagcgggatgccgttaacggacgcttcggcaaaatcaagagcatg
gcagcgggacggcgagccaagctgaacgaatcgcatcgtctgcaccagttcttcagggat
ctggacgatgaggagtcctggattaaggaaaagaagttgttggtgagctcggaggactac
ggacgtgatttgacaggggtgcagaatctgaggaagaagcacaagaggctggaggctgag
ctgggagcacacgagccggccattcagtctgtgttggagactgggaagaagctgtctgac
gacaacaccattggacaggaggagatccagcagagactggcccagtttgtggagcactgg
agggagctgaaggatctggctgctgcacgtgggcagaggcttgaagagtcgctggaatac
cagcagtttgtggcgaacgtggaagaagaggaagcctggatcaacgagaaactgaacctg
gtcggaagtgaagattacggtgatactctggcagctgtgcagggcttgctgaagaaacat
gaagcatttgaaactgattttactgtgcacagggaccgtgtgaatgatgtgtgttccaat
ggagatgaactcgttaaaaaggagaaccacaatgtggagaacatcatggctaaaatgaag
gcgttgcgtggaaaagtgttggagctggagagagcagcggcacagaggaaagccaagctg
gatgaaaactctgccttcctgcagttcaactggaaggctgatgtggtggagtcctggatt
ggtgagaaggaaaacagcctgaagactgatgactatggtcgcgatctctcctctgtgcag
acgctgctcaccaaacaggaaacctttgatgcaggacttcaggccttccagcaggagggc
atcaccaacatcacagctctaaaagaccagctgctggcagccaaacatgtgcagtctaag
gccatcgaggctcgtcacgccaccctgatgaagcgctggaaccaactactatccaactca
gcagcccgcaagaagaagcttctggaagcacaggaccacttcagaaaggtggaggatctt
ttcctcacgtttgccaagaaagcctcagccttcaacagctggtttgagaacgcagaggaa
gatctgaccgatcctgtgaggtgcaactctctggaggagattagggcactgcgggatgcc
catgatgccttccgctcgtccctgagctccgcagaggccgacttcagccagctggcagaa
ctcgatcggcagattaagagctacaacgtggtgtccaacccatacacctggttcaccatg
gaggctctggaggagacctggagtaaccttcagaagatcatcaaggagcgagaactggag
ctgcagaaggagcagcgccgacaggaagagaatgataaactcagacaggagtttgctcag
catgctaatgctttccaccaatggctgcaggagaccaggacataccttctggatgggtcc
tgcatggtggaagaatctggaactctagagtcacagctagaagccactaagcgtaagcat
caggagattcgtgccatgcgcagtcagctgaagaagattgaggatctgggagctgccatg
gaggaggcgctgattctggacaataaatacacagaacacagcaccgtgggtctggcacaa
cagtgggaccaactcgaccagctgggcatgagaatgcaacataacctggaacaacagatc
caagccagaaacactacaggtgtaacagaagaggccctgaaggagttcagcatgatgttc
aagcacttcgacaaagaaaaatctggccgtctgaatcaccaggagttcaagtcttgtctg
cggtctctgggttacgaccttcccatggtggaagaaggagaaccagacccagagtttgag
tccatcctggatatagtggatccaaacagggatggaaacgtgtccttgcaggagtacatg
gctttcatgatcagccgagaaacggagaacgtcaagtcaagcgaggagatcgagagcgct
ttccgtgctctgagcgcagaaaacaaaccctacgtcaccaaggaagaactctaccagaac
ctgacaaaggaacaagccgactactgcatttcccatatgaagccctacctagacagcaag
ggccgcgaaatcccatcagctttcgactttgtggaattcacccgctcgctcttcgtcaac
tga
DBGET
integrated database retrieval system
