Danio rerio (zebrafish): 553421
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Entry
553421 CDS
T01004
Symbol
cir1
Name
(RefSeq) corepressor interacting with RBPJ 1
KO
K06066
CBF1 interacting corepressor
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
553421 (cir1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cir_N
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
553421
NCBI-ProteinID:
XP_021334492
ZFIN:
ZDB-GENE-100922-268
UniProt:
A0A8M9PSH9
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All DBs
Position
9:2574122..2589595
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AA seq
359 aa
AA seq
DB search
MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLTFEKKQQEELMQAYVKEQETYNNRLLMG
DDRVKNGLNFMYEAPPGASKEETKEGGESEYKFEWQKVAPREKYAKDDMNIRDQPFGIQV
RNVRCIKCHNWGHVNTDRECPLFGLSGINASSMAGDEAGPSMHPSELMAEMRNSGFALKK
CVLGRSSTMSDPAQDFVASEEEEDPEVEFLKSLSTKQKQKLLRKLDRLEKKKDKKKKSKK
KSKKKQKKKSSKSSSSSSSDSSDSEDEKHSAKKAKKKKSKKKKDSSSDSESDSKHTHPKH
SSKGERESRERRREKSRSPQRWRDERERGKERCRSSSRERERGTRDRRERERDDRRRRE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcttttgctaatttcatgtgtaagaaggatttccatcctgcatcaaaatcc
aacataaagaaggtatggatcgcagaacagaagttgaccttcgagaagaagcagcaggag
gagctgatgcaggcatatgtgaaggagcaggagacttacaacaacagactgctgatggga
gatgatcgtgtgaaaaatggccttaattttatgtatgaagcacctccaggagcatctaaa
gaggagactaaagagggaggagagtcagagtacaagtttgagtggcagaaagtggctcct
cgtgaaaagtatgcgaaggatgacatgaatattcgagatcagccttttggcattcaggtg
cgaaacgtgcgctgtattaagtgtcataactggggtcatgtgaacactgaccgcgaatgt
ccgctgttcggcctgtcggggatcaatgccagctccatggccggagatgaagcaggtccg
tcgatgcacccctccgagttaatggcggagatgcgaaacagtggctttgcgctgaagaaa
tgtgtccttgggaggagcagcaccatgagtgatccggcacaggactttgtggccagcgag
gaggaagaagatcctgaggtggagttcctgaagtctctgtccaccaaacagaagcagaaa
ctgctcagaaaactggaccgtctggaaaagaaaaaagacaagaagaagaagagtaaaaag
aagagcaaaaagaagcagaaaaagaaatcgtccaagagttcgtccagcagctcatcggac
agcagcgactcggaggacgagaagcactctgcaaaaaaggccaagaagaagaagagcaag
aagaaaaaagactcatctagcgactcggagagtgactccaaacacacacatccaaaacac
agcagtaaaggagagagagagagtagagagaggaggagagagaaaagcaggagccctcag
cggtggagggatgagagagagagaggtaaggagagatgcaggagctccagcagagagaga
gaaagagggacgagagaccggagggagagagagagggatgacaggaggaggagggaatga
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