Danio rerio (zebrafish): 553451
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Entry
553451 CDS
T01004
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04517
IgSF CAM signaling
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
553451 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
553451 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
553451 (sptbn1)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
553451 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
553451 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
SOS1_NGEF_PH
PMC2NT
CAMSAP_CH
PH_13
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
553451
NCBI-ProteinID:
NP_001352121
ZFIN:
ZDB-GENE-031006-3
Ensembl:
ENSDARG00000102883
UniProt:
A0AB13A3L2
LinkDB
All DBs
Position
11:complement(45403038..45498584)
Genome browser
AA seq
2272 aa
AA seq
DB search
MDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIV
DGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLLWCQMKTAGYPNVNIHNFT
TSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVD
HPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIE
QTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQK
VYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLS
ENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVAVARELETENYHDIKRI
TARKDNVLRLWEYLLELLKARRQRLEMNLSLQRVFQEMLYIMDWMDEMKMLLLSQDYGKH
LLGVEDLLQKHALVEADIGIQADRVKAVNNNAQRFAVDEEGYKPCDPQVIRDRVAHMEFC
YQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDCGKDLTGAVRLLSQ
HRALEDEMSGRSGHLQHTVREGQAMADAGHFGEAKIRERIADVQAQWAALEQLASVRKTR
LEEACSLHQFQADADDVDTWTLDALRIVSTADVGHDEFSTQALVKKHKDASTEVASYRPV
IDALHEQAQTLPPEQANSANVSERLAGIEERYKEVSELTRLRKQALQDALALYKMFSEAD
ACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLIHSG
HPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYHLDCNETKSWIREKTKVIE
STQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADRLAGEHPDQAKAITGRLAE
ITAVWEEMKETLRTREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLAEAEK
LLAQHEGIKNEINNYEEDYQKMRDMGEMVTQDQTDAQYMFLRQRLQALDTGWNELHKMWE
NRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMD
ANEDKINGVVEAGRRLASDGNINADRIQERAASIDDRHKKNREAAVELLMRLKDNRDLQK
FLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKEGKQ
LVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDANKAELFTQSCADLDKWLVGL
EGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQSQAHVLRQEGKDTDEVDGR
RKVVEQKFQELLDPLLKRKNFLMASREIHQFNRDVEDEILWVEERMPLATSTDHGNNLQT
VQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILKADSPNVEGIRTRLSDLQGLWSLIMQE
TEKRHSRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQA
VEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAGLKDLSEERRGKLEERFRL
FQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNR
MADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILGR
ILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQDDAVRLQSAYAGDKAD
DIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSMVRDLMLWMEDVIRLIETQEKP
RDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKEKLLQLTDKRK
DMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSSRELGQSVDEVEKLIKRHE
AFEKSAATWEERFSALERLTTLELLEVRRLQEEEERRRKPPSPDPVQAQDGETQQREGEQ
IAQNGLPSDQDSPRDGVDGEMNGVAERSSKEPSPIPSPGADRRGKGSQSATLPTKGQETP
SAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYKDNKNAGQGIPYHNEIPIS
LKEAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTWIQAIQNAGSGSSSSEKSE
TAPSNQSTPASSRAHTLPATVSMTSESSPGKRDKDKEKDKEKRFSLFSKKKQ
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcgggatggacggatgctcatcaaactgctggaggtcctgtccggagagaga
ctgccgaagccgacgaagggccgcatgcggatccactgtctggagaatgtggataaagcc
ctgcagttcctcaaagagcagcgtgtgcatctggagaacatgggatcacatgatattgtc
gacggcaaccaccgactcacactcggactcatctggaccatcatcctccgcttccagatc
caagacatcagcgttgagacagaagacaataaagagaaacgctcagccaaggacgccctg
cttctgtggtgccagatgaagaccgcaggctatcccaacgtcaacatccacaacttcacc
accagctggcgtgatggaatggctttcaatgccctcattcacaaacacaggccagacctg
attgactttgacaaactgaagaagtccaacgctcactataacctgcagaacgccttcaat
ctggccgaacagcatctgggtctcaccaaactcctggatcctgaagatatcagcgtagac
catcccgatgagaagtctgttattacttatgtcgtcacatactaccattatttctccaag
atgaaggccttgaaagtggagggaaaacgtattggaaaggtgcttgacaacgccatcgaa
actgagaagatgatcgagaaatatgagtctctggcgtctgatctgctggagtggattgaa
caaaccatcatcatcctcaataaccgcaagtttgcaaactctctggttggagtccagcag
cagcttcaggccttcaacacctacaggaccgtagagaaaccacccaaattcactgagaag
ggaaacctggaggtgcttctgtttaccatccagagcaagatgagggctaataaccagaag
gtctacatgccacgagagggaaaactcatctcagacatcaacaaggcgtgggagcgtctg
gagaaagccgaacacgagcgagagctggcgctgaggactgaactcatccgacaggagaag
ctggagcagctcgccagacgcttcgaccgcaaagcagcaatgagagaaacctggctgagc
gaaaaccagcggctcgtttcacaggacaatttcggattcgacctccaggcggtcgaggca
gcaaccaaaaaacacgaagccattgagactgatatagcagcgtatgaggagcgtgtacag
gcggtggtggccgtggcccgagagctggagactgaaaactatcacgatatcaagcgaatc
acagcgcgcaaagacaacgtgctgcggctgtgggagtatctgctggagctgctgaaggcc
cgcaggcagaggctggagatgaacctcagtctgcagcgcgtcttccaggagatgctctac
atcatggactggatggacgagatgaagatgctgctgttgtctcaggattatgggaagcat
ttgctgggagttgaagatctgctgcagaaacacgctctggtggaggctgatatcggcatt
caggccgaccgcgtcaaagccgtcaacaacaacgcacagagatttgctgtggatgaggag
ggctacaaaccgtgtgatcctcaggtcatccgtgaccgtgtggcccacatggagttctgc
tatcaagaactgacacagctcgcagccgaacgccgcgctcgtctagaagagtcccgccgc
ctctggaagttcttctgggagatggcagaagaagagggctggattcgagaaaaagagcag
atattatcctccgacgactgcgggaaggatctaaccggcgccgtgcgtcttttaagccaa
catcgtgctctggaagacgaaatgagcggtcgttctggacacctccagcacactgtacgc
gaaggccaagccatggctgatgctggtcacttcggtgaagctaaaatccgagaacgcatc
gctgacgtccaagcgcagtgggcggctctagaacagcttgcatctgtaagaaaaacccgt
ttggaagaagcgtgtagccttcatcaattccaagctgatgctgatgacgtcgacacgtgg
acgttagacgctcttcgaatcgtttccaccgctgacgtcggccatgatgagttttcaacc
caagctttggtcaagaaacataaagacgcatcaactgaagtggctagctatcgtccagtc
atcgacgctcttcatgaacaggcccagactcttcctcctgagcaggcgaagagtgctaat
gttagcgagcggctggcgggcatcgaggagcgttataaggaggtttcggagttgaccagg
ctgaggaagcaggctttgcaggacgccctggcgctttataagatgttcagcgaagcggac
gcatgcgagctctggattgatgagaaagagcagtggttgaacagcatggagatcccggag
aaactagaggatctggaggtcattcagcacaggtttgagagtctggagcctgaaatgaat
aaccaggcctcacgtgtggctgtggtcaaccagatcgccaggcagctcatccacagcgga
caccccagcgagaaggacatcaaggcccaacaagacaaactcaacaccaggtggagtcag
ttccgtgatctggtggaccagaagaaagagtctctgaactccgctttgggagtccagaac
taccatcttgactgcaacgagaccaaatcctggatccgtgagaaaacaaaagtcatcgag
tccacgcaggagctggggaatgacctgacaggagtgatggctctacagcgcaaactcacc
ggcatggagcgggatctggccgccatcgaagccaaactaggagacctccgcggagaagca
gatcgattagctggagaacaccccgaccaggccaaagccatcacgggacggctagctgaa
atcaccgcggtttgggaggagatgaaggaaaccctccgaacccgtgaggagtctcttggg
gaagccagcaaactccagcagttcctccgagagctggacgatttccagtcttggctatcc
cgcacacagacggccatcgcttctgaagacatgcccaacacattagctgaagcggagaag
ctgctagcccaacacgaaggcatcaagaatgagatcaacaactatgaagaagactaccag
aagatgcgggacatgggagagatggtgacgcaggaccagacggacgcgcagtacatgttc
ctaaggcagaggctccaggcgctggacaccggctggaatgagcttcacaagatgtgggag
aaccgacagaacctgctgtctcagtctcacgcctaccagatcttcctcagagacaccaaa
caagcagaggccttcctcaacaaccaggagtatgttctggcccacaccgagatgcccacc
actcttgaaggagccgaagctgccattaagaagcaggaggactttatgaccactatggac
gccaatgaagacaagatcaacggtgtggtggaggccggcaggaggctggccagtgatgga
aacattaacgctgaccgcatacaagagcgagcagcctccattgatgaccggcataagaag
aaccgggaggcggccgtggagctgctcatgaggctgaaggacaacagagacctgcagaag
ttcctgcaggactgccaggagctgtcgctgtggatcaacgagaagatgttgacagcacag
gacatgtcctacgatgaagctcgaaacctgcacagcaaatggctcaaacaccaagcgttc
atggctgaactgcagtccaacaaagaatggctggacaaaattgagaaggaagggaagcag
ctggtctctgagaagccggagacagaagctgtggtgaaggagaagctggcggcgctgcag
aagatgtggactgaactggaaaccaccactcagactaaagcccagtgtctgtttgatgct
aataaagccgagctgttcacgcagagctgcgccgacctggacaagtggctcgtgggtctc
gagggtcagatccagtctgatgattacggcaaagatctgaccagcgtcaacatcctgctc
aagaaacaacagatgttggagaatcaggtggaggtgcgtcagagggaggtggaggagctg
cagtctcaggctcatgtgctccggcaggagggaaaagacacggatgaagtcgatggacgc
aggaaagtggtggagcagaagttccaggagctgctggacccgctgttgaagaggaaaaac
ttcctcatggcctctcgtgagatccaccagtttaaccgcgacgtggaggacgagattctc
tgggttgaagagaggatgcctcttgctacgtcaacagatcatggcaacaatttacagact
gttcagctattaatcaagaaaaaccagacactacagaaggagatccagggccatcagccg
cgctgcgatgatatatttgagcgcagccagagcattctgaaggccgacagccccaatgtg
gaggggatccggacccgtctgtcagacctgcaggggctctggagcctcatcatgcaggag
acagagaaacgccacagcagactggaggaagcccataaagcacagcagtattacttcgat
gccgctgaagccgaagcctggatgagcgaacaggagctctacatgatgtctgaagagaag
gccaaggatgagcagagttcagtggccatgctgaagaaacaccagatcttggagcaggcg
gtggaggattacgctgaaactgtgcaccaactgtccaagaccagccgaggcctggtggcc
gcaaaccaccctgaaagtgagaggattggcatgcgtcagtcacaggtggataaactgtac
gctggactgaaggatctgtcggaggagaggaggggcaaactggaggagcgcttccgtctg
ttccagctgaaccgtgaggtggacgatctggagcagtggatcgcggagcgggaggtggtg
gctggatctcacgaactcggacaggactatgaacacgtcactatgttgcaggagcgtttc
cgtgagtttgctcgcgacaccggaaacatcggtcaggagcgtgtggatggagtgaaccgc
atggcggacgaactgatcaacgctggtcatgcagacgccgcgaccgtagccgagtggaag
gacggtctgaacgaggcctgggcggatctgctggagctcatcgacacacgcacacagatc
ctcgccgcgtcctacgagctgcacaaattctaccatgacgccaaggagattctgggacgc
attctggacaaacacaagaagcttccggaggagctgggccgggaccagaacacagtggag
acgctgcagaggatgcacactacatttgagcacgacattcaggctctggggacgcaggtg
cgtcagctgcaggatgatgcggtgcgtctgcagtcggcgtatgcgggcgataaagcggac
gacatccagcggcgtgagggcgaggtgctggaggcctggaggagtctgctagaggcctgc
gagggccggcgagctcgcctgctggacaccggagacaagttccgcttcttcagcatggtg
agagacctgatgctgtggatggaggacgtcatccgcctcatcgagacgcaggagaagccc
agggacgtgtcgtctgtggagcttcttatgaacaaccaccagggcatcaaggctgaaatc
gacgcccgtaatgacagtttcacagcctgcattgagctgggcaaatctctgctggcacgc
aaacactatgcatcagaggagataaaagagaagttgctgcagttgacggacaagaggaaa
gatatgattgacaagtgggaggacagatgggagtggctgagactgattctggaagtgcat
cagttttctcgggacgcgggcgtggcggaggcgtggctgctgggtcaggagccgtatctg
tccagcagagagttgggtcagagtgtggacgaggtggagaagttgatcaagcggcacgag
gctttcgagaaatcagccgcgacctgggaggagcgattctcagcgctcgagagactgact
acgttggagttattggaagtgagaagactgcaagaagaggaagagaggaggaggaaacca
ccgtcaccagatcctgttcaggcacaggacggagaaacacagcagagagaaggagagcag
attgcccagaacggactcccgtcagaccaggactctccacgggatggagtggatggagag
atgaacggtgtggctgagaggagctcgaaggagccgagtcctatcccgtctccgggtgca
gacagacgagggaaagggagtcagtcggccacactgccgactaaaggacaggagaccccg
tcagctcagctggagggattcctgcaccgcaaacatgagtgggagggacacaacaagaag
gcttccagcagatcctggcataatgtgtactgcgtgatcaataaccatgagatgggcttc
tacaaggacaataagaacgcaggtcagggcatcccataccacaacgagatccccatcagc
ctgaaggaggccgtgtgtgaggtcgcggtcgactataagaagaagaaacacgtcttcaag
ctccgagttactgatggaaatgagtatctcttccaagccaaagatgatgaggagatgaac
acatggattcaggccatccagaacgccggcagcggctcgtcgtcctctgagaaatctgag
acggcgccgagtaaccagagcacaccggcatccagccgcgctcacacactcccggccacc
gtcagcatgaccagcgagtccagtcccgggaaacgagacaaagacaaggagaaggacaag
gagaagcgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
