Danio rerio (zebrafish): 553512
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Entry
553512 CDS
T01004
Symbol
slc27a1b
Name
(RefSeq) long-chain fatty acid transport protein 1B
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03320
PPAR signaling pathway
dre04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
553512 (slc27a1b)
09158 Development and regeneration
04382 Cornified envelope formation
553512 (slc27a1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dre01004
]
553512 (slc27a1b)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
553512 (slc27a1b)
Lipid biosynthesis proteins [BR:
dre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
553512 (slc27a1b)
Transporters [BR:
dre02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
553512 (slc27a1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
553512
NCBI-ProteinID:
NP_001070716
ZFIN:
ZDB-GENE-061013-672
Ensembl:
ENSDARG00000104949
UniProt:
Q08BF2
LinkDB
All DBs
Position
1:complement(61821812..61841320)
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AA seq
648 aa
AA seq
DB search
MGAGDGFRAPVALIIAGLLSALGVPWFWSLVSLLGVYLCSGGWRFVYVAVRTAKRDLIGL
QVLLRVKFYMRQYIRNRSTIPSLFAQRVALHPEKAALVDESSGEVWSFSELDRRSNAVAQ
WVLAQGWRSGDVVAIFMESRPQMVALWLGMAKVGVEPALINFNLRRDSLIHCMGVSGACG
MVFGAELLDVVLEVRESLRSLSLFSCGSAPAEMLDSLSAADLDALLSKSPETPPAVAHNK
GFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFSYYSFGLQPDDVVYCCLPLYHSAGNI
IGVGQCLLHGLTVVIRRKFSASRFWDDCVKYNCTVVQYIGEICRYLLSQPVRPSESLHRV
RVAMGNGLRPNVWESFMKRFSVKRIGEFYGATECNCSLANMDNKVGACGFNSVVLPSVYP
IRLLRADEDTMELIRDSRGLCVPCKPGEPGIIVGRINPQDPLRRFDGYANEEATSKKISH
NVFRKGDSAYVSGDLMVMDELGYVYFRDRGGDTFRWRGENVSTTEVEGVLSALLKQTDVA
VYGVSVPGVEGKAGMAAIADPENVFDCETFLRDVQNALPSYARPVFLRLSPEVDKTGTFK
IQKTRLQKEGFDPHQTADRLFFLNSRQGRYESLTEELHSAIMQGKVSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctggagatggttttcgtgccccagtcgctctgatcattgccgggttattgagt
gctctgggcgtcccgtggttctggagtttggtgtctcttctaggagtttatttatgttct
gggggatggaggtttgtttatgtggccgtgcgcactgcgaagagagacctcattggtctg
caagtgttactgcgcgtcaagttctacatgcgtcagtacatccgcaatcgcagcaccatc
ccgtctctattcgcccagcgggtggcgctgcacccggagaaagcggcgctggtggacgag
tcgtcaggtgaggtgtggagcttctcagagctggaccggcgctccaacgcagtggcgcag
tgggtgctggcgcagggctggcggtcgggtgatgtggtggccatcttcatggagagtcgc
ccccagatggtggcgctgtggctcgggatggctaaagtaggagtggagccggcgctcatc
aactttaacctgcgccgtgattcgctgatacactgcatgggcgtgtctggggcgtgtggg
atggtgttcggggcggagcttttggatgtggtgctggaggtgagggagtctctgcgcagt
ctctcgctcttctcctgtggttctgctcctgcagagatgctggactcgctgtcggctgca
gatctggacgctcttctttccaaatctcctgaaacaccacccgctgtcgcacacaacaag
ggcttcaacgacaggttattttacatctacacctcaggaacgacgggtttacctaaagct
gccatcgtggtgcacagcaggtattaccgtattgctgcgttcagttattactccttcggt
ctgcagccggatgatgtggtgtactgctgtctgccgctctatcactcagcagggaacatc
attggtgttggtcagtgtttgctgcacggcctgacggtggtcatccggaggaagttttct
gccagtcgtttctgggatgactgtgtgaaatacaactgtacggttgttcagtatattggt
gaaatctgccgttatctcctctctcagccggtgcgtccgtcggagtctctgcaccgggtg
cgtgttgccatgggcaatggtttgcggcctaacgtttgggaatcgttcatgaaacgcttc
agtgtcaagcgcatcggtgagttttacggagccacagagtgcaactgcagcctcgccaac
atggacaacaaggtgggtgcgtgtggcttcaacagtgtggttctgcccagtgtttaccct
atcagactgctgagggcagacgaggacactatggagttaattcgagacagtagaggactg
tgtgtgccatgcaaacctggagaacccgggattattgtgggcagaataaatcctcaagat
cctctgcgacgattcgatggctatgcgaatgaagaggccaccagtaagaagatcagccac
aacgtcttcagaaagggagattcggcgtatgtgtcaggtgatctgatggtgatggatgag
ttgggttatgtgtatttccgggatcgaggcggagacacatttcgctggcggggggaaaac
gtctccaccacagaagtagagggagtcctgagtgcactgctgaagcagacggatgtggct
gtgtatggagtctcagtgccaggtgtggaggggaaggcaggaatggctgctattgcagat
ccagagaatgtcttcgactgtgagacgtttctgcgggacgtccagaacgctcttccttca
tacgctcgacctgttttcttaagactttcacctgaagtggacaaaacaggcacatttaaa
atccagaaaacccgcttacagaaggagggatttgaccctcatcagaccgcagaccggctc
ttcttcctcaacagtcgtcagggtcgatatgagagtctgacagaggagctccacagcgcc
atcatgcagggaaaagtatctctataa
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