Danio rerio (zebrafish): 553522
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Entry
553522 CDS
T01004
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
553522 (tdrd1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
553522 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
Agenet
zf-MYND
Trimer_CC
DUF1645
Motif
Other DBs
NCBI-GeneID:
553522
NCBI-ProteinID:
NP_001157500
ZFIN:
ZDB-GENE-070803-1
Ensembl:
ENSDARG00000007465
UniProt:
F1Q7S6
LinkDB
All DBs
Position
12:complement(30345835..30359498)
Genome browser
AA seq
1176 aa
AA seq
DB search
MNPAFAQPMMRPNLPLRRPATGPSSLSPRGPAPAIYEERLLASDVLDGPKIDTMRKDISQ
NCGDVLSSPQTAVSMMGQVVKLCNYCSHQGNLRCTRCKKTCYCSVACQTQDWIAHRHVCK
PSIPEVTSEKPKESKAVPYANGLGGTQAKEISVDAQPKRIYRRDLHKKVVSKGSEIKGTV
IDLRNPGMFSIHCQCEEMIESLKKITQQLQKTYCSSFAQEYKPEVGELCAVKFSLDQNWY
RAEIQAVDVARKTAGVFYIDFGNEENVALDHIRPLSENIDAVPPFALQCCIAGVKPLTGS
WTGECCIAVRQLIAGKSLTFTVLDIMNDGDLLAVDSLVSTLGKHVSTFLIDQSYAIKEDV
PVKTQTEHSINSLLTASFENFKRFSGGKNENSEARPPEPLTQGVGDSFTAVVTHLQSPSE
ILCQKLENASIIQQLQMNLRVHCSNTAASDDFRPAPGTVCCSLFSEDNQWYRAKVLAYSS
EDRVCVGYIDFGNSEEVELNRLRPISKELLALATQAIPCSLAGIKSLTDTWSDEAVLMLK
HLVCNRFIRVEILGKKDGRALVSMIDESSDPQASVTELLVNMGFAAIESVETKKNEPDPA
TSTEIPPLSQPVVEKLEWTGAELPFDGQKVELVISTLKSLDEFYCYNYSKTDEHTLTEMS
FELMKHCESERAPFTPIVGEPCCALFTGDARWYRAMVLEVCGEGKARVCFVDYGNSCEVD
AAHLKAITQSLLKLPFQAIRCWLAGVEPVEGQWKKEAMLRFQALCAGQPLSGKVLSITEK
GYGMELESAGQTVASVLISEHLAKPYGQVRQPPQIQPAKPASQIEDLPSLKPIDQNPSVE
EPLKVSSKGAATTPEDLPVSSGCFPLNWKTLELSCSGTFQPRVAAVISPSLFYIMNPGQV
NVEGLKAVMTDVAKYCSKQPVPNQCHPLPGASCCAQFSGDKNWYRAVVLEVTTKHAHVIY
SDYGNMETVPLSSILPITKELLQHPFQIVRCALTGKEHFPVVWPTEVLELFGIQLSGGVL
ASFQGFDGTSNLLTLTQQSGQSDRDINSIILGALQKGQIKPSSKLPANVNEEKKDVEQKQ
TQPISSNKAVEQTLSTNVEKPALDDQTLPLSVSLKHEEPENMSKTKTAEECTSTPDTVSS
IESSHAAQSCCCQELKQKMDRIEELVLLLVKQVGSR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagccttcgctcagccaatgatgagacccaatctcccactgaggagacctgcc
actggacccagttcactttctcccagaggcccagcaccagccatttatgaagaacgcctg
ctagcaagtgacgttctggatggtcccaagattgacaccatgagaaaggatatcagtcag
aattgtggagatgtcttgtcttctccacagacagcggtgtctatgatgggccaagtagta
aagttgtgcaattactgcagccaccagggcaacttaaggtgcactcggtgtaaaaaaact
tgctactgttctgtagcttgtcagactcaggattggatcgcacatcgacatgtttgcaaa
cccagcattccagaagtcacaagtgaaaaacctaaggagtcaaaagctgtgccatatgca
aatggacttggtggcactcaagctaaggagatctctgttgatgcacagcctaagagaata
tatcgtcgcgacttgcacaaaaaagtggtttccaaaggttctgagataaagggcacagta
attgacctgagaaaccctgggatgttctccatccactgtcagtgcgaggagatgatagaa
tccctgaagaagattacccaacagcttcagaagacctattgctcttcattcgcacaagag
tataagcctgaagttggtgagctctgtgctgtcaaattttctcttgatcagaactggtat
cgagctgagattcaggcagttgatgtggcccgcaagactgctggtgtgttttacattgac
tttgggaatgaagagaatgttgcacttgaccacatacgacccctttctgaaaacattgat
gctgtgccaccatttgctttgcagtgttgtattgctggtgtaaaacctctgacaggaagt
tggactggtgaatgctgtattgctgttaggcagttaattgctggaaagagcctcactttc
acagtcttggacatcatgaacgatggcgatctgcttgctgtggattctcttgttagcact
cttggtaaacatgtgagcactttcctgatagaccagtcctatgccataaaagaggatgtt
cctgtcaaaacacagactgaacacagcatcaactcattgctgacagcatcctttgagaac
ttcaagcgcttttctggaggaaagaatgagaactctgaagcccggcctccagagccattg
actcaaggagtgggagactcattcactgctgtcgtcactcacctacagtcgccctcagag
attctctgccagaagctggaaaatgccagtataatccagcagttgcaaatgaacttgaga
gttcattgttcaaacactgctgccagtgatgacttcagacctgcaccaggaactgtctgc
tgctctctcttctccgaggacaaccagtggtacagagctaaagttctggcatattcctct
gaggatcgtgtgtgtgttggatacatagactttggaaactctgaggaggttgagctaaat
cgcttaaggccgatcagcaaggagctgttggctttggcaacacaagcaatcccctgttct
ctagcaggtataaagtctctaacagacacctggtctgatgaggcagttctgatgttaaaa
catctggtgtgcaaccgcttcattcgggttgagattctgggtaaaaaggacggtagggct
ctggtgtccatgatcgatgagtccagtgatcctcaggccagtgtcacagagctgttggtt
aacatgggttttgctgctatagaaagtgtggaaaccaagaagaatgaaccagatccagct
acctccactgaaattccccccctaagtcaacctgttgttgagaaattggagtggactggt
gctgaacttccctttgatggccagaaggtggagctggtgattagtacactgaagagcctt
gatgaattctactgttacaactacagtaaaacagacgaacacaccctgacagagatgtcc
tttgagcttatgaaacactgtgaatcagagagagctccctttacccctattgtaggagaa
ccatgttgtgctctcttcacaggagacgcccgctggtacagagccatggtgttagaggtg
tgtggagagggtaaagctagagtttgttttgtggattatgggaactcctgtgaggtggat
gcagcacacctcaaggccatcacacagagcctgctaaaactgcccttccaggcaatacgc
tgctggcttgcaggagtggaaccagtggagggccagtggaaaaaagaagctatgcttagg
tttcaggctctttgtgccggccagcctttgagtggcaaagtgctttccatcactgagaag
ggttatgggatggagctggaaagtgctggacaaactgttgcttctgtgctcatctctgag
cacctggctaaaccttacggacaggtcagacagcctccgcaaatacagccagctaaaccc
gccagtcagattgaagatctgccctctcttaaacccattgatcagaatccatctgttgaa
gagcctttgaaagttagcagcaagggagctgccactaccccagaagatttaccagtgtca
agtggctgttttcctttaaactggaagacattggagctgtcttgcagtggcactttccaa
ccaagagtggcagcagtaatcagccctagtctcttttacattatgaatcctggacaagtg
aatgtagagggtctgaaggctgttatgactgatgttgcaaagtactgcagcaaacagcca
gttcccaatcagtgccatcctttaccaggagcctcctgttgtgcgcagttttcaggtgac
aaaaattggtacagagctgttgtgttggaggtaaccacaaagcatgcacatgtcatttac
tctgattatgggaacatggagactgttcctctctccagtatccttcccatcaccaaagaa
cttctccagcatccattccagatagttagatgtgccctgacaggtaaagagcacttccct
gtagtgtggcctactgaagtgctggaactctttggcattcagttgagtgggggtgtcctg
gcatcctttcagggctttgatggaacctccaacctgttaacccttacccagcagtcaggt
caatctgacagagacattaattccattatccttggagctctgcagaaaggacagatcaag
cctagctcaaagctgcctgccaatgtcaatgaagagaaaaaggatgttgaacagaagcag
acgcagcctatcagctcaaataaggccgtagagcaaactctatctacaaatgttgagaaa
cctgccctggatgatcaaaccctgcctttaagtgtcagcttgaagcacgaggaaccagaa
aacatgtccaagacgaagactgcagaggaatgtacttcaacacccgacactgtgagcagt
attgagagcagccatgctgcacaatcttgctgttgtcaggagctgaagcaaaagatggac
cgtatcgaggagttggttctcctgcttgtgaagcaagttggatccagatag
DBGET
integrated database retrieval system
