KEGG   Danio rerio (zebrafish): 553572
Entry
553572            CDS       T01004                                 
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform 1
  KO
K24650  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    553572 (hmg20b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    BRAF-HDAC complex
     553572 (hmg20b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 DUF4763 PI3K_P85_iSH2 DUF4164 MlaC HMG_box_5
Other DBs
NCBI-GeneID: 553572
NCBI-ProteinID: NP_001018387
ZFIN: ZDB-GENE-030131-4258
Ensembl: ENSDARG00000042045
UniProt: Q503Z1
LinkDB
Position
22:20169352..20178413
AA seq 301 aa
MGGVKQEQTDAPASKDSQQTDSPQEENQSTSQPVKKRGWPKGKKRKKVLPNGPKAPVTGY
VRFLNERREHIRALHPDLPFPEITKRLGAEWSRLAPHDKQRYLDEAERDKMQYARELREY
QKSEAYQITCAKVQDKRIKREELTSVIINANSSGSSGFKNSDFTARFDVPIFTEEFLDQN
KAREAELRRLRKANVEFEEQNAVLQKHIADMFSAKERLEAELGQDELRTQALQRHLQAIK
QTLVSSLATVPLPGTGETPSIGTLDSYLSRLSSALESRPHEHRALVLKLQELLAHLDSEK
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggtggtgtaaagcaagagcagactgatgctcctgcatctaaagactctcagcagact
gattcgccacaggaagagaaccaatcgacttcacagccggtaaagaagcgaggttggcca
aaaggaaagaagagaaagaaggtattgccgaacggccccaaggctccagttaccggttat
gtccgtttcttgaatgagagacgggaacacatccgggcccttcatccagatcttcccttt
ccagaaatcaccaagagactcggggcagaatggagccgcctggcacctcatgataaacag
cgttaccttgatgaagccgaaagggacaaaatgcagtatgcacgagaactcagggagtat
cagaaaagcgaagcttatcagatcacgtgtgcaaaagttcaagacaagagaatcaaaaga
gaagagttgacttctgtcattatcaacgccaacagttcaggatcttcaggttttaagaac
tcagacttcacggccagatttgatgtccctattttcacagaagaatttttggaccaaaac
aaagcaagagaagcagagctccggcgtttgcgcaaggctaatgtggagttcgaggagcag
aatgctgttctccagaaacacattgccgacatgttcagtgctaaagagcgcctggaagct
gagctaggccaagatgagcttcgtacgcaggccctacagcgccacctacaggctatcaaa
cagacgctagtcagcagcttggctactgtgcctttaccaggcactggtgaaacgccgtcg
attgggacgctggactcatacctgagtcgcctgagcagtgctttagagagcaggcctcat
gagcatcgtgccttagtccttaagctacaagagctcttagctcacctggacagtgagaag
ctttga

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