Danio rerio (zebrafish): 553591
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Entry
553591 CDS
T01004
Symbol
ttc39c
Name
(RefSeq) tetratricopeptide repeat protein 39C
KO
K24943
tetratricopeptide repeat protein 39
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
553591 (ttc39c)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
553591 (ttc39c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
Cohesin_load
VEFS-Box
Motif
Other DBs
NCBI-GeneID:
553591
NCBI-ProteinID:
NP_001018404
ZFIN:
ZDB-GENE-050522-194
Ensembl:
ENSDARG00000102308
UniProt:
Q1LXE6
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All DBs
Position
22:complement(16056075..16082171)
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AA seq
579 aa
AA seq
DB search
MAGPDSPQQQQVEEKAEQIDDAELAFQGINMLLNNGFRESDELFRRYRTHSPLMSFGASF
VSFLNAMMTFEEEKMQMASDDLRTTEKLCESDNAGVIETIRNKIKKSMDSGRSGVEIVDR
LQRQIIVADCQVYLAVLSFVKQELSAYIKGGWILRKAWKMYNKCYSDISQLQEACRRRSS
DQQGALASDQANHNTSTGSGGRVTDEVLDRLKGSVSFGYGLFHLCISMVPPHLLKIVNLL
GFPGDRHQGLASLAYASESKDMKAPLATLALLWYHTVVQPFFALDGSDSRAGLLEAKAIL
QKKAMVYPNSSLFIFFKGRVQRLECQINSALASFQDALEFASDQREIQHVCLYEIGWCSM
IEMSFEDAFRSFERLKNESRWSQCYYAYLTGVCQGASGDLEGAKGVFRDVQKLFKRKNNQ
IEQFALKRAEKLRKVSLTRELCILGVVEVLYLWKALPNCSSSKLQLMNQVLQGLDDQSSI
GLKHLLLGAIQKCLGNIKDALQSFQLAAQDEYGRLNNSYVQPYACYELGCVLLAKPETLS
KGRSLLLQAKENYAGYDFENRLHVRIHSALASIKEVVPH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccagattccccgcagcagcagcaggttgaggagaaagccgagcagattgac
gacgccgagctcgcctttcagggcatcaatatgctgctcaataatggctttagagaaagc
gacgagctcttcaggagatacaggacccatagtccactgatgagcttcggtgccagtttt
gtcagcttcttgaatgccatgatgacgttcgaggaggagaaaatgcagatggcgagcgat
gacctgaggactactgaaaagctctgtgaaagcgataatgctggcgtcatcgagaccatc
cgcaacaaaatcaagaagagcatggactcagggagatcaggagtggagattgtggatcgt
cttcagaggcagatcatcgtggctgattgtcaggtttatctagctgtgctgtcattcgtc
aaacaggagctctcagcatacatcaaaggaggctggatcctccgcaaggcctggaagatg
tacaacaaatgctacagtgacatcagtcagcttcaagaagcctgtcgcagacgctcctct
gaccagcagggggcactggcctctgaccaggccaaccacaacacctcgaccggcagcggc
ggacgggtaacagatgaggttctagaccgcctgaaaggctcagtcagtttcggctatggg
ctctttcacttgtgtatttctatggtgcctccacacctgctgaagattgtgaacctgctg
ggcttccctggagatcgacaccagggtctggcctctttagcgtatgccagcgagagcaag
gacatgaaggcgccccttgccactttggctctgttatggtaccacaccgtggttcaaccg
ttcttcgctttagatggctcagattcacgtgctgggctcctggaggccaaagccatcctt
cagaagaaggccatggtttacccaaactcctctctcttcatcttcttcaagggacgcgtg
cagagattagagtgccaaatcaacagtgcgctggcatcatttcaggatgctctggagttc
gcctcagaccaaagagagattcaacacgtgtgcctctatgaaatcggatggtgcagtatg
atcgaaatgagttttgaagatgccttcaggtcattcgagcggctgaagaacgagtcccga
tggtcacagtgttattatgcttacctcaccggagtatgtcagggggcttctggagatctg
gagggagccaagggggttttccgagacgtccagaagcttttcaaacgcaaaaacaatcag
attgagcagtttgcattgaaaagagcagagaaactgaggaaagtgtctttaacgcgagag
ctgtgcatcctgggagtagtggaggtgctgtacttatggaaagctcttccgaactgctct
tcctctaaactccagcttatgaaccaagtgctgcaggggctcgacgaccagtcaagcata
ggcctgaaacacctgctgctcggtgctattcagaaatgcctgggaaacattaaagacgct
ctgcagtcattccagctggcagcgcaggatgaatacggtcgtctcaataacagctacgtt
cagccctatgcctgctacgagctgggctgcgtcttacttgctaaacctgagactttgagt
aaaggaaggtcattgctgcttcaggccaaggagaattacgccggttacgacttcgagaac
cggctgcacgtgcgaatccattctgccctcgcctctataaaggaagtggtccctcactga
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