Danio rerio (zebrafish): 553718
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Entry
553718 CDS
T01004
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide A
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
553718 (nefma)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
553718 (nefma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Homez
Motif
Other DBs
NCBI-GeneID:
553718
NCBI-ProteinID:
NP_001104684
ZFIN:
ZDB-GENE-050522-205
Ensembl:
ENSDARG00000021351
UniProt:
F1QCR7
LinkDB
All DBs
Position
21:complement(20380623..20385228)
Genome browser
AA seq
849 aa
AA seq
DB search
MSYPIDTIGSPYRRVMDTRTSYSSPSSGFRSQTWSRTSPSSSSYKRSFNVPVARAYGSAV
LSSADSLDFTQNSIINGDYKRSNEKEQLQGLNDRFAGYIDKVHFLEQQNQQIEAEIQALR
QKQVSQSQLGELYDQELQELRSMLEQTHHEKAQIQLDTDHIEEDIQRLRDRFDEEARIRE
ETEAIVRALKKDMGDSALVKAELEKKVQSLQDEIAFIRNNHQEEISDLLAQVQASQITVE
KRDYQKADITDALREIRSQLEGHSTQNLQQVEDWFMCRYSKLTEAAEQNKSAIKSARDEI
SDYRRQLQSKTVELESVRGTKESLERQLNDIEDRHNNDLASLQETIHQLENELKSTKWEM
ARHLREYQDLLNVKMALDIEIAAYRKLLEGEESHFSTFPYRQTVTKGPKVKSEPPKLKVQ
HKFVEEIIEETRVEDEKSEMDEALAEMAEELSAAKEDEEGGEEEGEAEEGEEGGDDEEGE
KEDEGEGEEEEVVASTQAKVASAAPAEEEEEGEKEGGDEEQEEEEEAGKGDEEEEKGEEE
EGEEEKKEEEAEEEAEESKAPEAKASPESEKAEEKQASGGEEEAEEEGDENQEGDAGSDK
GSTDEKEVEVKEQPKKAEPEAAKEDKKGKEEKEEAKSEKEKATVTETKAESPKAESPKAE
SPKAESPKSESPKSESPKKETPKTEAPKKDPPKSEPPKTESPKKEEPKAEPSKKETPKSE
PSKAEPKEDFPKPADEKATKKSETEKEPEDKKKEATVNGDMGKKDDKKVSDKKEVISNGV
DESPTKDESSQRVVITKTVETITTGEDGVKQVTKTVTVTEKGEEVQETVQEKVVSKPAEK
QAVKATEAD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccgatagatactataggaagcccctaccggagggtgatggacaccaggacg
agctattcgagcccctccagcgggttccgctcccagacctggtcccggacgagcccgagt
tcttcctcatacaagaggagctttaacgtcccggttgcgcgagcctacggctcggcagta
ctgagctccgccgacagcctcgacttcacccagaattccatcatcaacggagactacaag
cgctccaacgagaaggagcaacttcaggggctcaacgaccgatttgccggctacatcgac
aaggtgcactttctggagcagcagaaccagcagatcgaggcggagatccaggcactgcgg
cagaagcaggtgtcgcagtctcagctgggcgaactttacgaccaggagctgcaggagttg
cgctccatgctggagcagacccaccacgagaaggcgcagatccagctggacactgaccac
atcgaagaggacatccaacgcctgcgggaccgcttcgacgaggaagcccgcatcagagaa
gagacggaggcgatcgtccgcgccctgaagaaggacatgggtgactcagcactcgtcaaa
gcagagttggagaagaaagtgcagtccctgcaggacgagatcgcgtttatccgcaacaac
caccaagaggagatcagcgacctcctggcgcaggtgcaggcgtcgcagatcaccgtggag
aagagggactaccagaaggcggacatcaccgacgcgctgcgcgagatccgttcccagctg
gagggccattcgacgcaaaacctccagcaggtggaagactggtttatgtgccgctacagc
aaactcaccgaggccgccgagcaaaacaaaagcgccatcaaatccgcgcgggacgagatc
tcagactaccgccgccagctacagtccaaaaccgtggagctggagtctgtccgaggaacc
aaagagtctctggagaggcagctgaacgacatagaagaccgacacaacaatgaccttgcc
agcctgcaggaaaccatccaccagctggaaaatgaactcaagagcacgaaatgggagatg
gcacggcatctgcgtgaataccaggacctcctgaatgtcaaaatggcattagatatagaa
attgctgcatacagaaaacttcttgaaggagaggagagccactttagcactttcccatac
cgccagaccgtcaccaaaggccccaaggtgaaaagtgagccacccaagcttaaagtacaa
cacaagttcgtagaggagatcattgaagagacgagggtggaggatgagaagtctgagatg
gatgaggctttggctgaaatggcagaggagttgtcagctgccaaagaagacgaggaagga
ggagaagaggagggagaggctgaggaaggagaagaaggaggtgatgatgaggagggagag
aaagaagatgagggtgaaggagaagaagaggaggtggtggcatcaacccaagccaaagta
gcctctgcagcccctgctgaggaagaagaggagggagagaaagagggaggtgacgaagaa
caagaagaagaggaggaagctggaaagggtgatgaggaggaagagaaaggagaggaggag
gagggtgaggaggagaagaaagaagaggaagcagaggaggaagcagaagaaagcaaggca
cctgaagcaaaggcctctcctgaaagcgagaaggcagaggagaagcaggccagtggagga
gaagaagaagcagaggaagaaggtgatgagaatcaagaaggagatgcaggcagcgacaaa
ggatcaaccgatgaaaaagaagtggaagtaaaggagcagcctaagaaagcagaaccagaa
gcggccaaggaagacaagaagggaaaagaggagaaggaagaggctaaatccgagaaagaa
aaagcaactgtgacggaaaccaaagcagagtctcctaaagcagagtctcctaaagcagag
tctcctaaagcagagtctcccaaaagcgagagcccaaagagcgaaagccctaaaaaggag
acgcctaaaaccgaggctcccaaaaaggatcctcccaaaagtgagcctcccaaaactgag
agtcctaagaaagaggaacccaaggctgaaccttccaagaaggagactccgaagtcagaa
ccatccaaggctgaacctaaagaagatttcccaaaaccagcagacgagaaagccacaaag
aagagcgaaacagagaaggagcctgaagataaaaagaaagaggcaaccgtgaacggagac
atgggcaagaaagatgacaagaaagtgtctgataagaaggaggtgatctccaacggagtt
gacgaaagcccaaccaaagacgaaagcagccagagggtggtgatcaccaagacggtggag
accatcaccactggagaagatggagtcaaacaagtcacaaaaactgttaccgtcaccgag
aagggggaggaagtgcaggagaccgtccaggagaaggtagtctccaaaccagcggagaag
caggcagtgaaggcaaccgaagccgattag
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