Danio rerio (zebrafish): 553760
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Entry
553760 CDS
T01004
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a
KO
K25057
PC4 and SFRS1-interacting protein
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
553760 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
553760 (psip1a)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
553760 (psip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
553760
NCBI-ProteinID:
NP_001018562
ZFIN:
ZDB-GENE-050522-104
Ensembl:
ENSDARG00000104710
UniProt:
A0A8M1N6J5
Q504G1
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All DBs
Position
1:28089703..28195267
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AA seq
413 aa
AA seq
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MAQDFKAGDLIFAKMKGYPHWPARIDEIPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFP
YLTNKDKYGKPNKRKGFNEGLWEIENNPKVELNGHKVKKVGEVSIKDLSSNEEGDDEKRT
KSAQIAHSEGLEDEVDIEKEDGGDMDVSDQRLVKDEDLSQKDSTNVTAKAKRGRKRKSDA
EQDSDTENSSPTAGGSGLDFLSTGTSIMLLKRRGRKSKTEKSIILQQQASKELPRSGKDG
KRDERKGDKRKESTLQKLHGEIKTSLKIGNLDVRKCVHALDELSSLHVTTQHLQRHSELI
ATLKKICRFKSSQDVMDKAIMLYNKFKSMFLMGEGESVLSQVLNKSLTEQKLFEEAKRGV
LKNTEQTKEQKDTKILNEDFNSEEDAETEKDKLGGNILSMVKNNMTDPAEESV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggatttcaaagctggtgatctgatttttgctaagatgaagggttatccacac
tggcctgcaaggattgatgagattccagatggtgctgtcaaaccatcaaatataaaattt
cccatcttcttttttggcactcatgaaacagcattcctgggtcctaaagacatattcccc
tatttgaccaataaagacaaatatggcaaacctaacaaaaggaagggtttcaatgaaggc
ttgtgggaaattgaaaacaatcctaaagtggagcttaatggacacaaggtaaaaaaggtt
ggagaagtttcaattaaagatttgagcagcaatgaagagggagatgatgagaagaggaca
aagtcagctcaaattgctcacagtgaggggctggaggacgaggtggacattgagaaggaa
gatggtggtgacatggacgtttctgatcagagacttgttaaagatgaagacctatcacag
aaagattcgacaaatgtcactgccaaagctaaaagaggaaggaagagaaagagtgatgct
gaacaagactctgatacagaaaattcaagcccaactgcaggcggttccggtttagatttc
ctatcaacaggtacatcaattatgttactgaagcgcagaggaaggaaatctaaaacagag
aagtcaataatactacaacaacaggcttcaaaggaattaccaaggtcaggtaaagatgga
aagagagatgaaagaaaaggtgacaaaagaaaggagtccacactgcagaagttgcacggg
gagattaagacatcattgaagattggtaatttagatgtaaggaaatgtgtacatgcattg
gatgagttaagctctctacatgttaccactcaacatcttcagagacatagtgaactcata
gcaactctgaaaaagatctgcagattcaaatccagccaggatgtgatggacaaagctatt
atgctatataataagtttaaaagtatgtttttaatgggagaaggagaatcagtgctaagt
caggtgctcaataaaagtctgactgaacagaaactatttgaagaagccaagaggggagtc
ctaaaaaacacagaacaaactaaagagcagaaagataccaagattttgaatgaagacttc
aactccgaagaggacgctgagacagagaaggacaaattaggaggaaacatcttatctatg
gtgaaaaacaacatgactgatcctgcagaagagtctgtctga
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