Danio rerio (zebrafish): 553785
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Entry
553785 CDS
T01004
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a isoform X1
KO
K07523
netrin-G1 ligand
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
553785 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
553785 (lrrc4ca)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
NGL family
553785 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Mid2
DUF7617
Ig_6
Sp38
DUF4293
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
553785
NCBI-ProteinID:
XP_021326167
ZFIN:
ZDB-GENE-050522-533
Ensembl:
ENSDARG00000113411
UniProt:
Q503I7
LinkDB
All DBs
Position
25:complement(10487935..10873500)
Genome browser
AA seq
647 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAPPDEGHPTVQQKNGPT
PSSGIWETLPPSFTTTTTTARTPLSTKATDKTYTIPVTAQSDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRAIEIINVDEDCMTGGPAMESHLALPPL
DHEHLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggcactgtccgacccattgtttgtgctgtcgctggccctgcagcttttggtggtggct
ggtctggtgcgagcacagacctgcccctccgtctgctcttgtagcaaccagttcagcaag
gtcatctgtacgcgccgtggccttcgagatgtacctgatggtatttccaccaacacaaga
tacttgaaccttcaggagaacctcatccaggtgattaaggtggacagctttaaacatctt
agacacctggagattctgcagctcagcaaaaaccacattcgtaacattgaaatcggagcc
ttcaatgggctggccaatctcaacacactagagctctttgataatcgactaaccacaatt
cccaatggggctttcgagtacctgtctaaacttaaggagctttggttgaggaataaccct
atcgagagtataccctcttatgccttcaaccgtgtaccatcgttgagaaggttggacttg
ggtgaactgaaaaggctgtcatatatctcagaaggtgcctttgaaggcctcagcaacctg
cggtacctgaaccttggtatgtgcaacttgaaggagatccccaacctcattcctcttgtt
cgtttagatgagttggagatgtcaggaaaccagctctctataattaggccaggatctttc
aaaggccttgtccatttacagaaactgtggatgatgcatgcacagatccagacgattgag
agaaatgccttcgatgatctccagtcccttgtggagctcaatttagcccacaataacctt
acactcttgccccatgacctcttcaccccacttcaccacttggagagggtgcacttgcac
cacaacccttggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtaccggccaataccagttgctgtgcccgctgttcatcacctaccagccacaaaggtcgc
tacattggtgaactcgaccagaattatttccattgttatgcaccagtaatcgtggagcct
cctgcggatctgaacgtaaccgagggcatggcggcagaactgaaatgtcgagcaaattct
ttgacctcggtgagctggattacacctaatgggtctattatgacacacggggcgtacaag
atacgcatttctgtgctcaatgatgggacgttaaactttaccaatgtcacaatgcaggac
acaggaacatacacttgtatggtgagcaactccgcaggcaacactacagcctctgctaca
cttaatgtgtcctcaacagagaacagcagcttcagttacttcaccacagttaccgtcgag
accacagaagctccacctgatgagggccacccaacagtacagcaaaagaatgggcccact
ccctcttctggaatttgggagaccttgccaccttccttcaccaccaccacgaccacagca
cggacgccactgtctacaaaggctaccgacaagacctacaccatccctgtcacagctcag
agcgacggctccctcaacaccttggatgaggtcatgaagaccacaaagatcatcatcggt
tgctttgtggctatcacactcatggcagctgtcatgctgattatattttataaaatgcgc
aaacagcatcaccagcagaaccaccacgcgccaacgcgagccatcgagatcatcaatgtg
gatgaggactgcatgacgggtggacctgccatggagagccacctagccctgcccccactt
gatcatgagcacctgaatcattacaacgcctacaaaactgcatacaaccatgcctccacc
atcaattctatacacagctctgcccacgaacctttactaattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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integrated database retrieval system
