Danio rerio (zebrafish): 553943
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Entry
553943 CDS
T01004
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a precursor
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
553943 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
553943 (lrit1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_5
fn3
LRR_14
Motif
Other DBs
NCBI-GeneID:
553943
NCBI-ProteinID:
NP_001018174
ZFIN:
ZDB-GENE-040924-5
Ensembl:
ENSDARG00000019179
LinkDB
All DBs
Position
13:32851064..32856381
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AA seq
643 aa
AA seq
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MSLTVFLGLLLASGGFPLVRSTCPTQCSCFYHNLSDGSRARSVICNDPEISLVPASFPGD
TSKLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLS
SFPWESLMDMPSLRLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLT
IKPTLGAESSKLILGLHDNPWLCDCRLYDLVQFQKSPSLSVAFIDTRLRCADPESLSGVL
FSDAELRRCQGPRVHTAVARVRSAVGNNVLLRCGTVGVPIPELAWRRADGKPLNGTVLLE
NSKEGIVWSILSVPAVSYRDTGKYICKATNYAGSAEAVISLIINDAPKMENPTLDPKPKL
KSKKPNTMVKAAYQEKHIATYVSPTPKNGLPLSGTVSYTGPYPGMESDNAANSRMNTQTA
SPDGFLETNLSNLAANTSSLQQDPDRVVRSVKVIGDTDYTVCLNWRAPTAKNTTAFSVLY
AVFGERDMRRINVSPGNNRIVIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDAAASANG
TQKLINVVVITVACVIAVPLTVIVCCGALKRKIKKFLGKNSKDIQDSYVTFETLSPSTKA
KGLEGEYLTRLNAEESNRLLSARSSLDSESTAKIEGQPNEYFC
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcactgtctttttgggtctcctactggcatctggaggatttccacttgttcgg
agcacctgtcctacacagtgcagctgcttttatcataacttgagtgatggatcaagagcc
aggagcgtgatttgcaatgatccagagatttccctggtgcccgcctcattcccaggcgac
acatccaaacttcgcatcgaaaagactgccatcaagaggatcccgagcgaggcttttagt
tacctctcaaacttagaatttctctggatgtcgtttaacgttttatcctctctgaactcg
gacagtttccgcggcctatacagtttagaggaactaaggctggatggaaattcgctctct
tcgtttccgtgggaatccctgatggacatgccgagtctgaggctccttgatatccacaac
aatcagctctcctcgctgccttctgaagctgctctttacatgaaaaacataacctatctg
gatttatccagcaataatctgctgacggtaccagccgaagttctcaacacttggttgaca
attaaacccaccctgggagcagaaagttcaaaattgattcttggtcttcatgacaacccc
tggctgtgcgactgtcgtttatacgatcttgtccagttccagaagtctcccagtctgtca
gtggctttcattgacacgaggcttaggtgtgctgatccagagagtctgtctggagttctg
ttcagtgatgctgagctccggcgctgccaaggacctcgggttcacactgctgtggcccgt
gttagaagtgcagtgggaaacaatgtcttgctgcgatgtggaaccgttggggttcccatc
cccgagctggcctggagaagggcagatgggaagccactgaacgggacagttctactggag
aattcgaaggagggaattgtttggtctattttaagtgtaccagccgtatcctatcgcgac
actggaaaatacatctgcaaagccacaaattatgcaggcagtgcagaagctgtgatttct
ttaatcataaacgatgcacccaaaatggaaaatccaaccctggatccaaaacccaaacta
aagtccaaaaagccaaacactatggtcaaagcagcatatcaagaaaaacacatcgccact
tatgtttccccaacacctaaaaatggactaccactcagtggcacagtgagctacacaggc
ccgtatcctggaatggagagcgacaatgctgctaacagtcgaatgaatacccaaacagcc
agtccagatggcttcttggaaaccaatctgagcaacttggccgcaaacacatcctcgctc
caacaagaccctgacagggtagtgcgctctgtgaaagtgattggtgatacagactacact
gtgtgtctgaactggagggctccgaccgccaaaaacaccaccgccttcagcgtcctctac
gctgtgtttggggagagagatatgcgcagaattaacgttagtcccggcaacaaccggatc
gtcattgagggactggttccaaaaaccaaatacatcgcctgtgtgtgcgtcaaggggctg
atccccaaaaaggagcagtgtgtaatcttctcaacagatgcggcagcgagcgctaatgga
acccaaaagctcattaatgtagtagtaatcacggtcgcctgcgtgatagctgtgcctctg
actgtgatcgtgtgctgtggggcgcttaagaggaaaattaagaagtttctgggcaagaac
tctaaagacattcaggactcgtatgtgacttttgagactctatctcctagcaccaaggcc
aaaggcttggagggggaatatcttaccagactgaatgctgaagagtccaacagactcctg
tcagcccgctccagcttagactcggagtccactgccaagattgagggacagccaaatgaa
tacttctgctga
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