KEGG   Danio rerio (zebrafish): 553981
Entry
553981            CDS       T01004                                 
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00600  Sphingolipid metabolism
dre01100  Metabolic pathways
dre04382  Cornified envelope formation
Module
dre_M00094  Ceramide biosynthesis
dre_M00099  Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    553981 (sptlc1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    553981 (sptlc1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dre01007]
    553981 (sptlc1)
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     553981 (sptlc1)
Amino acid related enzymes [BR:dre01007]
 Aminotransferase (transaminase)
  Class II
   553981 (sptlc1)
SSDB
Motif
Pfam: Aminotran_1_2 PAD Cys_Met_Meta_PP
Other DBs
NCBI-GeneID: 553981
NCBI-ProteinID: NP_001018307
ZFIN: ZDB-GENE-050522-61
Ensembl: ENSDARG00000042995
UniProt: Q502G6
LinkDB
Position
10:5707298..5738217
AA seq 472 aa
MASGQQWVLVEMVQAFYEAPAYHLILEGFLILWIIRLLFSKTYKLQERSDLTEKEKEELI
EEWQPEPLVSPVSKDHPSLNYDVVTGPPSHKIIVNGKECINFASFNFLGLLDNERVKLKA
LASLKKYGVGTCGPRGFYGTFDVHLELEERLAKFMRTEEAIIYSYGFATIASAIPAYSKR
GDIIFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKEQEIEDQKNPRKARVIRRF
ILVEGLYINTADICPLPELVKLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDID
LISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPG
IFRVLREKCRNVHKALQGTAGLKVVGESFAPALHLQLENSTGSRVNDLKLLRAIVDYSLD
RQVALTLARYLDKEERFLPPPSIRVVVTVEQTQEEIEKAAQCIREAALHVLK
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcgtcggggcaacagtgggtgttggtggagatggtgcaagctttttacgaggcccca
gcatatcacttaattttagaaggttttctcattttatggattatccgactgctgttttcc
aaaacgtataaacttcaggagagatcagacctcacagaaaaggagaaagaggagttaatt
gaagagtggcaacccgaaccgctggtctcccccgtatctaaagaccacccttccctcaat
tatgatgtggtcacagggcctccaagccacaaaatcattgtaaatggcaaagagtgcatt
aactttgcctcgtttaacttcttgggtctgcttgacaatgagcgcgtgaagttgaaggca
ttggcgtcactcaaaaaatatggcgtgggaacttgtggaccaagaggattctatgggacc
ttcgatgttcatctggagttagaggagcgattagcgaagttcatgaggacggaggaggcc
attatctactcgtacggcttcgccaccatcgccagtgccattccagcttactccaaacga
ggagacatcatctttgttgatgaagcagcctgtttctctattcagaaaggccttcaggcg
tcacgcagcttcattaaatacttcaaacacaatgatatggaggatcttgaacgccttctg
aaggagcaagagattgaagatcagaagaatccgcgtaaggcaagagtgatccggcgattc
attttagtcgagggtctctacatcaacactgcagatatctgcccactgcctgaactggta
aaattgaagtacaaatataaagtgcgaatctttctggaggagagcatgtcttttggagtg
cttggcgaacacggaagaggagtcacagagcattttggggtcaacatcgacgatattgac
ctcataagtgcaaacatggagaatgcgttggcatccatcggaggtttctgctgtggaaga
tcattcgttattgatcatcagcgtttgtcaggtcagggttactgtttctcagcatctctt
ccccccatgctggctgctgctgctatcgaagccctgaacatcatggaggaagatccagga
attttcagggttctgcgggagaagtgcagaaatgttcacaaagcactacaagggaccgca
gggctgaaagtagtgggtgagtcttttgctccggctcttcatctacagctggaaaacagc
acaggatcccgagtgaatgacctgaagctgctccgagccattgtcgattacagtttggac
agacaggtcgcactaacgttggctcgctacctggacaaagaagagcgctttcttccaccg
ccaagcattcgagtagttgtgaccgtcgaacaaacgcaggaggaaatcgagaaggcagca
cagtgtattcgagaagcagctttacatgttctgaaatga

DBGET integrated database retrieval system