Danio rerio (zebrafish): 554138
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Entry
554138 CDS
T01004
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform 1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
554138 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
554138 (rpap2)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
554138 (rpap2)
Protein phosphatases and associated proteins [BR:
dre01009
]
HAD phosphatases
Fcp/Scp phosphatases
554138 (rpap2)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
554138 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-GeneID:
554138
NCBI-ProteinID:
NP_001264859
ZFIN:
ZDB-GENE-050522-420
Ensembl:
ENSDARG00000038397
UniProt:
B0UYH6
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All DBs
Position
2:complement(10790875..10821053)
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AA seq
601 aa
AA seq
DB search
MDAGEVTRKSRPSKSKKKGGKGTQAISAEDEAKRREAVKEQLRQKLELERKARQVVERLL
EDSVTEEFLMDCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNVPTQQYKISTKTNKV
YDITERKCFCSNFCYKASKSFELQISKIPLWLRKEESPPEIKLMKQGDGGSSGQEIKLID
KPITEADIDNPIEDIPESNKDLIQGENGDIEQDFVSSVVSNQHKQVHWGKLPKRDEVSED
AAEYSHSEHEQRINGENKDESESSQTPQPQKDTTDHPALEKNASEIEGTLELLNQDKSTQ
QEGENTSSSQPESDISVPVAGDLNITQVGMSKRSAAGLKGLLKDHHKAKTASTAISQCLL
ERLRQAFIEWRTKETMIFLYGPDYASGMQLSTAGAWEEEQLDEDDLDEAEVGVRSAEGGP
SRTSAPVPDVETLRKETEMLELRVREFYKGVCVLPEEVETAAVKETEHTQDSGKDPPLPL
VDSHAQHQIQKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPE
WTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVLLFKPCVPIQ
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatgccggtgaagtgacaagaaagagtcggccctcaaagtccaagaagaaaggtgga
aagggaacccaagctatttcagcagaggatgaagcgaaaaggagggaagctgttaaagaa
caactccgacagaagcttgagttggagcgtaaagcccggcaggtggttgagcggctgttg
gaggacagcgtgacagaagagttcctcatggactgtgcctggcacatcactcctgccaac
tacaaagacactgtggaagaacgatccattgctaaactgtgtggatatcccatgtgccca
aataaattaactaatgtgcccactcaacaatataaaatatccaccaagacaaataaagtc
tatgatattacagagcgtaagtgcttttgcagtaatttctgctacaaagcctccaaaagt
tttgagctccagatatcaaagattccactttggcttcgaaaggaggagagtccacctgag
attaagctgatgaaacaaggagatggaggcagctcaggacaggagataaagctgattgac
aagcctataacagaagcagacatcgacaatcccatcgaggacattcccgagtctaacaag
gacttgatccagggtgaaaacggtgacatcgaacaagactttgtctccagtgtggtgtcc
aatcagcacaaacaagttcactggggaaaactgccaaagagagatgaagtgagtgaagat
gctgctgaatattcacattcagaacatgaacaaagaatcaatggagaaaataaagatgaa
agcgaatcttcacaaactcctcaaccacaaaaagacacaaccgatcatcctgcactggaa
aaaaacgcctctgaaattgaagggactttggagcttttgaatcaggataaatcaacccaa
caggaaggtgaaaacacaagctcttcacagcctgaatctgacatctctgttcctgtggct
ggcgacctgaacattactcaggtgggaatgagtaaaagatcagctgcgggcctcaaaggc
ctgttgaaggatcatcataaagctaaaacggcttctacagccatcagtcagtgtcttctg
gagcgtctacggcaagcctttatagagtggagaactaaggaaaccatgatatttctttat
ggtccggattacgcctcagggatgcaactgtctacagcaggagcatgggaagaggagcag
ttggatgaagatgacctggatgaggctgaggtgggcgtgagatcagctgaaggaggacct
tccagaaccagcgctccagttcctgatgtggagactctgagaaaagagacagaaatgttg
gagctgagagtgagggagttttacaaaggagtgtgtgttctgccggaagaggtcgagacg
gccgctgttaaagagactgaacacacacaggacagtgggaaagatccccctctgcctttg
gttgattctcacgcgcagcaccagattcagaaacgcattgttgtggagaagctcagccac
agcttgagagatattgttggaccccttcgtctaacaatgagtgatgtcatcaatgatgta
aataatttggtccggacattcagatttacgaacacaaacattattcacaaaagcccagag
tggactttaattgctgtggttcttctgtcagtgttaacagaagtgtcaccattgttgcga
gagtcgttggcgagcgtgtcttcgttagaatacatctcctgtttcatgaaagagctgaaa
ctggaggacaaagatcttcacaacctcgtgctgctcttcaaaccgtgcgtccctatacaa
acgtga
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