KEGG   Danio rerio (zebrafish): 554204
Entry
554204            CDS       T01004                                 
Symbol
polB
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    554204 (polB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    554204 (polB)
Enzymes [BR:dre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     554204 (polB)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     554204 (polB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     554204 (polB)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2 HHH_2 Cdd1 DUF4806
Other DBs
NCBI-GeneID: 554204
NCBI-ProteinID: NP_001003879
ZFIN: ZDB-GENE-040830-1
Ensembl: ENSDARG00000003749
UniProt: B0R194
LinkDB
Position
8:3686523..3699433
AA seq 339 aa
MSKRKAPQESLNEGITDFLVELANYERNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAK
KLDGVGAKIAEKIDEFLTTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVR
NLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRSEMQKMEALILKELDIVDPEYIGTICGS
YRRGAESSGDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQ
LQKEKEEEEEEEESLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEY
TIRPLGVTGVAGEPLLVDSEKDIFEYIQWKYREPKDRSE
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgagtaaacgaaaagcgccacaagaatccctgaacgaaggaatcactgattttctcgtt
gagctggccaattatgagagaaatgtcaacagagccatccataaatacaatgcttacaga
aaagcagcgtctgtcatcgcgaaatatcctcagaagatcaaaagtgggacagaagcaaag
aaactggatggagtcggtgcaaagatagcggagaaaatcgacgagtttttaacaacagga
aaactgcgcaagctggaaaagattcgcaatgacgacacaagctcctccatcaacttccta
accagagtgactggaatcggtcctgctgccgccaggaagttttttgacgagggcgtcagg
aatttagaagatttaaagaagatcgaacacaaactcaatcatcatcagcagatcggctta
aaatactttgaggagtttgagaagagaatccctcgttcagagatgcaaaaaatggaggct
ctgatattgaaagaactggatatagtggatccagagtacatcggcaccatctgcggcagc
tacagaagaggagcagagtcgagtggtgatattgatatactgctgacccatccggacttc
acatctcagtctgagaaacagccgaagctccttcatgccgttgtggatcatctggagtcc
atcggcttcattactgacacactgtctaaaggagacactaaattcatgggtgtgtgtcag
ctgcagaaagaaaaagaagaagaggaggaggaggaggagtctttacaccgccgtattgat
atcaggcttatccctaaagatcagtattactgcggtgtgctgtatttcaccggcagtgat
atattcaacaagaacatgaggactcacgcactagagaaaggcttcacgctcaatgagtac
accatccgtccactgggcgtcactggtgtggcaggagagcctctgctggtggacagtgag
aaggacatctttgagtacatccagtggaaatacagagagccgaaggaccgcagcgagtga

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