Danio rerio (zebrafish): 554849
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Entry
554849 CDS
T01004
Symbol
gabpb2a
Name
(RefSeq) GA-binding protein subunit beta-2a
KO
K09454
GA-binding protein transcription factor, beta
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
554849 (gabpb2a)
03029 Mitochondrial biogenesis [BR:
dre03029
]
554849 (gabpb2a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
554849 (gabpb2a)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
554849 (gabpb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
ANK_LRRK2
LodA_N
Phage_tail_terminator_6
TFIIA
Motif
Other DBs
NCBI-GeneID:
554849
NCBI-ProteinID:
NP_001093447
ZFIN:
ZDB-GENE-030131-5733
Ensembl:
ENSDARG00000007943
UniProt:
A3KQS6
LinkDB
All DBs
Position
19:complement(7432710..7441948)
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AA seq
407 aa
AA seq
DB search
MSLVDLGKRLLEAARNGHDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHEVIVDLLIRSGADINAKDMLKMTALHWAAQHGHHNVA
ELLIKHGADVHALSKFCKTAFDIAVDIQHPDLMHLLQEGMENQVNRNAEASIINGSSTPQ
FIIQGVPNIQGGVVNLTDLIKTNSGDTEEAIAVSALDSSIQQVVNESGQRVITILTDQHG
NLQTNGLGQPFFVTMQDGRQVLAVPANQITEEVVEESEPPARKRKIEVASNNTETGETEH
LQWQLQEANRKAQSYRQQLLRKEQEAEEYRMKLEAMENGQSNGTAALQQEHVVFVQEELA
VEETAEGEEEVVVFSEGDVIIKTEEIESAEEQITLVEATAGHTEVVS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggtggatctgggaaagcgtctgttggaagcggctcgtaatggtcatgatgat
gaggtccgaacactaatggccaacggagctccgttcaccacagactggcttggaacgtct
ccattacatttagcagctcagcatggtcattactccacagctgaggtcctgctgagggcg
ggtgtcagcagagatgctcgaacaaaggtggacaggaccccactgcacatggcggccaca
gagggccatgaggtcatcgtggatttattaatccggagtggagccgacatcaacgctaaa
gacatgctgaagatgacggctcttcactgggcagctcaacacggccatcacaatgtcgca
gagctgctgattaaacacggcgctgatgttcatgccctcagcaagttctgcaagaccgct
tttgacatcgccgttgacatccaacaccctgatctcatgcatctattgcaggagggaatg
gagaatcaggtgaacagaaatgcagaagcatcaatcataaacggctcctcaacaccacag
ttcatcattcagggcgtcccgaacatccaagggggagtcgtaaatctcacagacttgatc
aaaaccaactctggtgacactgaggaggccatcgctgtcagtgctttggactcgagtatc
cagcaggtggtgaatgaatcgggtcagagggtcataaccatattaacagatcaacatgga
aacctgcagactaatggacttggtcagccgttttttgtaacgatgcaggatggacgacaa
gtattggcagttcctgccaatcagatcacagaggaagtggtggaggagtctgaacctcct
gcccgtaaaaggaagattgaagttgcgtccaataatacagagactggtgaaacggagcat
ctccagtggcagctgcaggaagctaacagaaaagctcaatcgtatcgacagcagctgctc
cgcaaagagcaggaggccgaggagtaccgcatgaagctagaggccatggaaaacggacag
agcaacggcacagcagctctccagcaggagcacgtcgtgttcgtacaggaggagctcgct
gtcgaagaaacagcggagggggaggaggaggtcgtggtgttttctgaaggcgatgtcatc
atcaaaactgaagaaatcgaatctgccgaagagcagatcactttggtggaagcaacagcg
ggtcacactgaagtcgtttcataa
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