Danio rerio (zebrafish): 555257
Help
Entry
555257 CDS
T01004
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X19
KO
K25219
synergin gamma
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
555257 (synrg)
Membrane trafficking [BR:
dre04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
555257 (synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
555257
NCBI-ProteinID:
XP_003200075
ZFIN:
ZDB-GENE-030131-9396
Ensembl:
ENSDARG00000073926
UniProt:
A0A8M9PUQ3
LinkDB
All DBs
Position
15:complement(18316656..18413777)
Genome browser
AA seq
1193 aa
AA seq
DB search
MALRPGSGGGGSFMYPVGGGIGPPQGMMPMQQQQQQGFPMVQVMQPNMQGMMGMNFGAQM
PGAMPIQGGMAMGMQTPGMQFMGQPQFMGMRAPGPQFPADIQKQMAEEHQKRLEQQQRML
EEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPSSQSK
KPGVGAYPQQDMQPMVPTWLYNDSLIPELFKKVLEFTMTPAGIDTAKLYPILISSGLPRE
ALGQIWALANRTTPGKLTKEELYTVLALIGVAQSGLTVMSLDILSQFPSPPVPNLPAMTM
AIPAVLPQHQQPIMTQPPVSMPMPTAAPPVMSMTPNPPAQPPATFITNFPPVQATKADDD
DFQDFQEAPKAGVGDDSFTDFQGETGGTFPSMTSSSQSSVPAMLTPVSGSSSSSSDKYAV
FKQLSVEQPAEPTPAVSDSGDKYSVFRELEPPSERKPVGEGFADFKSVSADDGFTDFKTA
DTVSPLDPPDQAKFQPTFPPPFASSQSLSHSQPASLAQPRNPLNMADLDLFTTMAPPTST
ADSKLNLFPSAPPSLVLPSAVVKPPSMGGDDFGDFALFGSSSSSEVAPTTSAAGRGASTT
VQDDFADFMAFGSSRDQRSETSSREGNSEGQTETSQQRHQIGTDKYDVFKQLSLEGGLAY
DDNKESGGGSFSSLKSDNDDFADFQSSKFCTALGASDKSLVDKVAAFKQAKEDSTSVKSL
DLPSIGGSSVGKEDSEDALSVQLDMKLSDMGGDLKHVMSDSSLDLPGLSSHQPPAAESDD
MKFDPFGTSTVSSLGSYDWSDKDDLPSGQGKKLQGGSQGSLPSSAVVQRKETSFGSSENI
THTTVAKVTTFPIEDNSSTSESQFEAFADFGSIEQAGQDDDDDFGDFASTVSEKSDSPPS
ATEAEGNQGEMTDEFGAFQGDKPKFGKSDFLKASTQAKVKSSEEMIKNELATFDLSVQGS
HKRSHSLGEKEIVRSIPSPAPEQPFRDRSNTLNEKPALPIIRDKYKDLTGEVEESERYAY
EWQRCLESALQVITTANNTLNGISSSTVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIK
ATAVCSEKLQELLKDISRVWNNLMGFMSLANLTPDESSLDFSSCILRHGIKNAKELACGV
CLLNVDSRSKAFNSETDNFKLMYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcggcccggatcagggggaggtggcagctttatgtaccctgttggagggggc
attggaccaccgcaaggaatgatgcccatgcagcaacagcagcagcagggcttccctatg
gtccaggttatgcagcctaacatgcaaggcatgatgggaatgaattttggagcacagatg
cctggcgccatgccaatacagggtgggatggcgatgggcatgcagacccctgggatgcag
ttcatgggtcagcctcagttcatgggcatgagggccccggggccgcagttccctgcagac
atacagaagcagatggcagaggagcatcaaaaacgactggagcaacagcagcggatgctg
gaggaggacaggaagaggagacagtttgaagaacagaaacagaagctacgtctactcagc
agcgtcaaacccaagactggggagaagagtcgtgacgatgccttagaggccatcaaaggc
aatctggatgggttcagcagggatgccaagatgcatccaacaccatcttcacagtccaag
aaaccaggtgtgggtgcctacccccaacaagacatgcaacccatggtgccaacctggttg
tacaatgactcgctcattccagagttattcaagaaggttcttgagttcaccatgacacca
gcaggcattgacacagccaaactctatccaattttgatctcctctggtcttcctcgggaa
gcactcgggcagatttgggcattggccaaccgtaccacacctggcaagctgaccaaggaa
gagctgtacactgtactggccttaattggagtcgcccagagcggtcttacagtcatgagt
ttggacatcctgagtcagttcccatccccgccggtgcccaatctacccgccatgactatg
gccattcctgctgtcctgccacagcaccagcagcccatcatgacccagccacctgtgtct
atgccaatgcccacggctgcaccacctgtcatgagcatgaccccaaaccctccagcacaa
ccaccggccacctttatcaccaactttcctcctgttcaggctaccaaggcggatgacgat
gatttccaagacttccaggaagcccctaaagctggtgttggagatgactcattcacagat
ttccaaggagagacagggggaacgttccccagcatgacatcatcatcccagagcagtgtt
cctgccatgctgactccagtgtcggggtcttcatcttcctcctctgataaatatgcagtg
tttaaacagctgtcggtggagcagcctgcagaacccacgcctgctgtctcggattcaggg
gacaaatacagtgttttccgagagcttgagccaccttcagagcgaaaaccagttggggag
ggatttgctgatttcaagtctgtcagtgccgatgatggcttcacagactttaaaacagcc
gacaccgtctctccactagacccaccagaccaggccaagtttcagccaacctttcctcct
ccttttgcttcctctcagtccctgtcccattctcagccagcctctctggctcaacctaga
aatcctctcaatatggcagacctggatctcttcacgacaatggctcctcccacgtccact
gcagactctaaactcaacctgttcccttccgctcctccatccttggtattgccctcggca
gttgtgaaacctcccagcatggggggtgatgactttggcgattttgccctttttggctcc
tcctcatcctccgaagtagctcccaccacctctgctgctggtagaggagctagtacaacg
gttcaggatgactttgctgacttcatggcatttggcagctcgagagatcagagaagtgag
accagctcaagagaaggcaatagcgaaggccagacagagacatcccaacagaggcaccaa
atcggtactgataaatacgacgtcttcaaacagctttctctagaaggtggactggcctac
gatgataacaaagaaagtggtgggggctccttttcgtcactcaagagtgacaatgacgac
tttgcggattttcagtcctccaaattctgtacggcgctgggtgcgtccgacaagagcctg
gtggacaaagtggctgccttcaagcaggccaaagaggactccacctcagtgaagtccctg
gacctcccatccatcgggggcagcagtgtggggaaggaggactctgaggatgcgctttca
gtacagctagacatgaagctgtcggacatgggtggagacctgaagcatgtgatgtctgat
agctccttagacctccctggtttgtcgtcccatcaacccccagccgcagagtctgatgat
atgaaatttgacccatttggcacatccaccgtcagcagtctaggcagctatgactggtcc
gacaaggacgatctcccatcggggcaaggtaagaagctccagggtgggtctcaaggtagc
ctgccctcttcagctgttgtccagaggaaggagacgtcttttgggagctcggaaaacatc
acacacaccacagtcgccaaggtcacaaccttcccaatcgaagacaatagctcaaccagc
gaaagccagtttgaagccttcgctgactttggctcgattgagcaggccggacaagatgat
gatgatgacttcggtgacttcgccagcacggtttcagagaaatcggactctcctcctagt
gccacagaagcagagggcaaccagggcgaaatgacagatgagttcggagcctttcaaggt
gacaagcccaaatttggcaagtcagactttttgaaggccagcacacaggctaaggtgaaa
tccagcgaggagatgatcaagaacgaacttgccaccttcgacttgtcagtgcaaggttcc
cataagcgcagccacagtctgggagaaaaggaaatcgtacgctccatcccctctcctgcc
cctgagcagcccttcagagaccgatccaacaccctaaatgaaaaaccagcgctgccgatc
atccgcgacaagtacaaggaccttacaggagaggttgaggagagtgagcgatacgcgtat
gaatggcagaggtgtttggagagcgctctacaggtcatcaccaccgccaataacaccctc
aatggcatcagcagctccacagtgtgcacggaagtcatccagtcggcgcagggcatggag
taccttctgggtgtggtggaggtgtatcgtgtgaccaagcgtgtagagctgggaatcaaa
gccacagccgtttgttcagaaaaactacaagagctacttaaagacatcagccgcgtgtgg
aacaacctgatgggcttcatgtcgctggcaaacctcacacctgatgagagctcgctggac
ttctcctcctgtatactgaggcacggcattaagaatgccaaagagctggcgtgtggagtg
tgcctgctcaatgtggactcacgcagcaaggccttcaattcagagacggacaacttcaag
ctgatgtacggaggtcaccagtaccacgccagctgtgccaacttctggattaactgtgtg
gagcccaaaccgccaggtctcatcctgcccgacctgctctag
DBGET
integrated database retrieval system
