Danio rerio (zebrafish): 555419 Help Entry 555419            CDS       T01004                                  Symbol pcdh12 Name (RefSeq) protocadherin-12   KO K16499   protocadherin delta 2 Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:dre04515]     555419 (pcdh12) Cell adhesion molecules [BR:dre04515]  Cadherins   Protocadherins    555419 (pcdh12) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 Motif Other DBs NCBI-GeneID:  555419 NCBI-ProteinID:  XP_683010 ZFIN:  ZDB-GENE-140106-126 Ensembl:  ENSDARG00000076594 UniProt:  E7F5T8 LinkDB All DBs Position 14:complement(18680870..18703159) Genome browser AA seq 1174 aa AA seqDB search MLQVLLLLAALFECQVCLANNMGSAHLTIQYRVWEEQPPGTRVGRLLDDLRERGETGSLE NFQVVQHGHALPVTVASRDGTVSTFGRLDREELCWGTELCELAFNVLYRKGGAMHLLSVR VEVMDLNDHNPVFPSLLQEVEISETASLRMRIPLDRAADPDAGPNGLQTYTLSSNQHFAL DVRSFGGAKQAELVVTKELDRELQASLELELIAWDKGNPPKSGSTKIIVTILDSNDNSPI FEEAPSVIELAENTIRGTIVLNLRATDPDQGANGEVEYSLSKHSPLEVQRLFSIHPKTGA LTLQGPLDFEEKNVYEVDIQARDLGPNGIPSHHKLQIKLQDINDNAPRIHITWTPPDSPV ATVTEGAPNETFLALVMVSDADYGANGQVQVHILTGSGPFRLKQIHGDNYMIVTNGTLDR EKQMEYNLTLLAQDSGDPSLSCIKHLTVHVLDENDNPPIFTKSHYRSILKENNTPGFHFL TVEAHDVDLGLSGQVSFSIRESNELGTPTAFFSVHPSSGEVTVQQSLDYEESRVYSFIVE AVDQGYPPMTSIAAVLVEIQDVNDNYPIIYEPLPKKGIALLNVPVNVDKGEIVTELGDKA MEDNFHKHRNYSSLNKPEGFLATTIRASDPDSGLNGRLNFGITGGNPSNIFFLDKTSGEF YVNTTNATELIGRTFKLGIEVSDMGTPILSTRTTLEVTFINFRDHLKNLSHDNQAQYSFT MLLAICLGSTCLVLFLIIALAKTFCHPNKRDNRAYNCRQAESTYTRHPRRPQKHIQKTDI QLVPVLRGRRETSQEDEAEALSSTSPLVEKAHSQSQFTFTPTLARMTQNQAHTEMDGNLP LTQSKILKKPGSIEWNGTLPYTSGTPCRTLQKTRNSSSSSFANSQASTLRRNKIEESKPT SMDTSQTVTSVSSNQATLRRPKTTEKRGRMEESDQRQILRNLVRLSMAAFAENGSFELSS ASPEVQQVSQLLSLLHQGQLQPRPNFRGNKYSHRAGRSGAQDADWLSTKDSGHGESEMGD MDWETGRDSPVDHLYEEGLNNLLTSDDVFSDVPDPAWMARLSLPLSTDYHENLFIPDGPP SPDALCTMSSLDDFTSFSTFGKTLESQPLGGRALMSEVSSLFEMLLTQKADAQSCPPADV LYRLSAAYGRSLGLDVPVNGGAVTSRQQAQTSIM NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgctccaggttttgctccttctggcagctctttttgagtgtcaagtttgtcttgccaac aatatgggctctgctcacctcactattcaatatcgtgtctgggaagaacagccacctggg acaagggtgggccgcctcctggatgatctacgtgagcgtggggaaacagggtcactagaa aacttccaggtcgtccagcatgggcatgcccttccggtgacagttgcttcaagagatggt acagtgtccacgtttggccggctggacagagaggagctatgctggggaacagaactttgt gaactggccttcaatgttctctacagaaaaggtggtgctatgcatttactctcagttcgt gtggaggtgatggacctaaatgaccacaacccagtttttcctagtctactgcaggaggtg gagatctctgagactgcttcactgagaatgcgaattcctcttgatcgggctgcagatcca gatgcagggccaaatggcctccagacctacaccctgtcttctaaccagcactttgctttg gacgtccgttcttttgggggggctaagcaggctgaattagtggtcaccaaagaactggac agggagttgcaggcctctttagaactggagttaatagcctgggacaaaggaaacccacca aaatcaggcagcacaaaaattattgtcacaattcttgactcaaatgacaacagcccaata tttgaggaagccccttcagttattgagctagcagagaacacaattcgtgggacaattgtc ttaaatcttcgtgctacagaccccgatcaaggtgctaatggggaagttgagtactccctt agtaagcattccccactggaagtacaaagactatttagcattcatcccaaaacaggtgct ttgactttacaaggccctttagattttgaagagaagaatgtatatgaggtagacatccaa gctcgagatctagggcccaatggtatcccatctcaccacaagttgcaaattaaattgcaa gatataaatgataatgctccccgcatacacattacatggactcccccagactcccctgtt gcgacagtcacagagggagcaccaaatgaaactttccttgctcttgtgatggtatctgat gcagattatggggcaaacgggcaggtacaagtgcacattttgactggttctggccctttc agactcaaacaaatccatggagacaactacatgattgttaccaatggcactctggatcgt gagaaacaaatggaatataaccttactcttctcgctcaagacagtggtgatccatctctg tcctgcattaagcacttgactgtccatgttttggatgaaaatgataacccaccaattttt accaagagccactaccggagtatcctgaaagagaataacacacctggcttccatttcttg actgtggaggcacatgatgttgacctgggtctcagtggacaggtatctttctccattaga gagtcaaatgaactggggacaccaacagcatttttctctgttcaccccagcagtggggaa gtgactgtccagcaatcattagactatgaggaatcccgcgtctactcatttattgtggag gctgtggatcaagggtacccaccaatgaccagcattgcagcagtgctggttgaaatacag gatgttaatgacaattaccccataatttatgagcctctacccaagaaggggattgcattg ctaaatgtcccagtgaatgtggacaaaggggagattgtgactgaacttggagataaagca atggaggataatttccacaaacatagaaattactcttccctcaacaaacctgaaggattt ctggccaccacaattagggctagtgatccagattctggtctcaatggaagactcaatttt ggaataacaggcggcaacccttctaatatattttttctggacaaaacatctggggagttc tatgttaacacaactaatgccacagaacttattgggagaacatttaaactgggaattgaa gtatctgatatgggaactccaatactaagcacaagaaccactttggaagtgactttcatt aattttcgtgaccatctgaagaacttgtctcatgataaccaggcccagtatagctttaca atgcttttggccatctgccttggatctacctgtctggtattatttttaatcattgcttta gccaagacattctgtcaccctaacaaacgggacaaccgtgcttacaactgtagacaagct gagtccacgtacactcgccacccacgacggcctcagaagcacattcaaaagactgacatc cagctggtgccagtgcttcggggtcgtagagaaacgtctcaagaagatgaagctgaggca ttatcatctacatcacccttagtggaaaaagcacattcacagagccagtttacctttaca ccaacacttgctcgcatgactcaaaatcaagctcatacagaaatggatgggaacctgcca ctcactcaaagcaagatactcaaaaagcctgggagcatagagtggaatggaacacttcca tatacctcaggaaccccatgccggaccctgcaaaagacaagaaattcttcctcatcatca tttgcaaactcacaggctagtacgctcagacgaaataaaattgaagaatccaagcccact agcatggacacctcacaaactgtgacttcagtttctagtaatcaggcaacattgcggaga ccaaagaccacagaaaaaagaggaaggatggaagaatcagaccaaaggcagatcctgagg aaccttgttagactctctatggcagcctttgcagaaaacggttcttttgaactatcttct gcctcacctgaagtgcaacaggtgtctcagctcctgtctctgttgcatcaggggcaactt cagcctcgaccaaattttcgtggcaacaagtattcccacagagctggcaggtcaggggcc caggatgctgattggctgagcactaaagacagtggtcatggtgagagcgaaatgggtgat atggactgggaaacaggcagagactcacctgtggaccacttgtatgaagaaggactcaat aatctactgacttctgatgatgttttctcagacgttcctgatccagcatggatggctcgt ctttctcttcctctgtcaaccgactaccatgaaaacctgttcatcccggatggtccaccg tcccctgatgccctctgtaccatgagcagtcttgatgatttcacctccttctccactttc ggcaaaaccctggagtcgcagccactgggtggcagagctctgatgtcagaagtgagctct ctgtttgagatgctgttgacacaaaaagcagacgcacagtcatgtccaccggccgatgtt ctctacagactctcagcagcttatggacgatcactcggcttagatgtacctgtaaatgga ggtgctgttacctcacgccaacaagcgcagacttctataatgtag

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