Danio rerio (zebrafish): 555459
Help
Entry
555459 CDS
T01004
Symbol
otud5a
Name
(RefSeq) OTU domain-containing protein 5-A
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
555459 (otud5a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
555459 (otud5a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
555459 (otud5a)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
555459 (otud5a)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C85
555459 (otud5a)
Ubiquitin system [BR:
dre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
555459 (otud5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
555459
NCBI-ProteinID:
NP_001068578
ZFIN:
ZDB-GENE-030616-61
Ensembl:
ENSDARG00000059006
UniProt:
Q08BW0
LinkDB
All DBs
Position
8:8860927..8922631
Genome browser
AA seq
560 aa
AA seq
DB search
MTILPKKKPNSSVGVSDHPDDPDRRTGSDPHQHQHQHSHGVRPGARPRASPPPWSYQAAP
PASREDRRTESSSRPQQASPPPVGAGSSGGPGDATGMACVSGNRAELSGGVGCGGGMGGC
CSGPGLSKRRRQATCSGGVAGGGTGPGAAGGGGGGGGGGGVGGPSPEQEEGAGYNSEDEY
ENASRLQSEDPATVEQQEHWFEKALQEKKGFVIKKMKEDGACLFRAVADQVYGDQDMHEV
VRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQSG
TEPINTFHGIHQNNDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPAFKPGFADQSLMKN
AIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASAT
CSSATAAASSGLEEWNARSPRQRSSAPSPEIPDPAHSDTAAKPPSPAGALALSKPPSPCA
PGPSNQACVGPDRPTSSSLVSLYPALGYRAIMQEMSPTAFGLTDWEDDEILASVLAVSQQ
EYLDSMKKNAMHREPSPDSS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcctgccgaagaagaagccgaactcgtcggtcggtgtgtccgatcaccctgac
gaccccgaccgacggaccggctccgacccgcaccagcatcagcaccaacactcccacggg
gtccggccgggtgcgaggccccgcgcttccccgccaccctggtcctatcaagccgctccg
ccggcgtccagagaggacaggcgaactgaatccagctcccggccgcagcaggcctctcct
ccgccggtgggtgccgggtcctcgggtggccccggggacgcgacagggatggcgtgcgtg
tcaggcaatcgggctgagctgtcaggtggggtgggctgtggaggtggcatgggaggttgc
tgttcggggcctgggctcagtaagagaagacgacaagcgacttgctccggtggggtggcc
ggtggaggcaccggacccggggctgcggggggtggaggcggcggtggtggaggaggtgga
gtagggggtcccagtcccgagcaggaggaaggagccgggtataacagtgaggatgagtat
gagaatgcttccagactacagtcagaggacccagcgactgttgaacagcaggaacactgg
tttgaaaaagcactccaggaaaagaaaggatttgtcatcaaaaaaatgaaggaagatggt
gcctgcctcttcagagctgttgctgatcaagtttacggagaccaggatatgcacgaagtc
gttcgcaagcactgcatggattacttgatgaaaaatgcagattacttctcaaactatgtg
acagaggacttcactacatacatcaacagaaagaggaagaacaactgtcatggcaaccac
attgagatgcaggcaatggcagagatgtacaatcggccagttgaagtttatcagtccggc
acagaaccaatcaacacgttccatggcatccatcaaaataatgacgagccaatcagagtt
agttaccatcgaaacattcactataactctgtagtgaatcccaacaaagccactattgga
gttgggctcggacttcctgccttcaaacccgggttcgcagatcagtcactcatgaagaat
gccatcaaaacgtcagaggaatcctggattgagcaacagatgctggaggacaagaagagg
gctacagattgggaagccaccaatgaggctatagaagagcaagtggccagagaatcgtat
ttacagtggcttcgagatcaggagaaacaggcacgacagcctcgtaaggccagtgctacg
tgcagctctgccacggctgcggcctccagtggtttggaagaatggaatgctcgatctcca
cggcaacgaagctccgccccttctccagagattcctgatcccgcacactcggacacagcg
gccaaacccccgtcccccgccggagccctcgctctgtccaaacctccgtcgccctgcgca
ccaggtcccagtaaccaggcttgcgttggaccagacagacccacctcgtcttctctggtg
tctctgtatccagcactcggttatcgggccattatgcaagagatgtcccctactgcattt
ggcctcacagactgggaagacgatgagatactggcgtcggtcttggccgtgtcacaacag
gaatacctcgatagcatgaagaaaaacgccatgcatagagaaccttctccagacagcagt
tga
DBGET
integrated database retrieval system
