Danio rerio (zebrafish): 555476
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Entry
555476 CDS
T01004
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
dre
Danio rerio (zebrafish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_13
LRR_9
LRR_5
LRR_At5g56370
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
555476
NCBI-ProteinID:
NP_001038251
ZFIN:
ZDB-GENE-050208-523
Ensembl:
ENSDARG00000040853
UniProt:
Q1L8Y7
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All DBs
Position
22:complement(29595294..29644460)
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AA seq
561 aa
AA seq
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MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGASPAVAFTLDSTIKRPNPPPST
RKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPE
VGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLP
YGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactctgggcaaagataaagactctaaggagagggaacccaaagctgaaggg
aaatccaaaaccaaagggaaagatgccaaagatgggaagaaagacacaagcggtgcttcg
cccgcggtggcctttaccttggacagcacgataaagcggcccaatccgccgcccagcacg
cgcaaaaaatccagcaatgccgaggtcatcaaggagctgaacaagtgccgcgaggagaat
tcgatgcgcctggatttgtccaagagatccatccatctgttgccctcgtccatcaaggag
ctgacccagctgaccgagctctacctgtacagcaacaagctgcaaagcctgccgcccgag
gtgggatgcctgtcaggattggtgacgctggcgctcagtgagaactctctgaccagccta
cctgactcgctggacaacctgaagaagctgcggatgctcgacctgcggcataacaagctg
cgggagatcccggctgtggtgtaccgcgtcagctccctcaccacactctacctgcgcttc
aaccgcatcaccaccgtagagaaggacatcaagaatctgtccaaactcacaatgctgagc
atccgagagaacaagattaaacagctgcccgcagagatcggtgagctctgtaacttgatc
acgctggatgtagcccacaaccagttggagcaccttcctaaagagattggaaattgcact
cagatcaccaaccttgacctgcagcacaatgatcttctcgatctgcctgagactataggt
aacttggcaagtataaaccgtctaggtttgaggtataaccgcctatcagcgatccctcga
tctttagcaaagtgcagagagctggaagagctcaaccttgaaaacaacaacatctcggtt
ttaccagaggggcttctctccagtctggtgaacctgacaagtctgacgctggcgcgaaac
tgtttccagtcttacccagtgggcggcccgtcccagttttccaccatctattctctcaac
atggagcacaaccgtatcaacaagatcccttttggcattttctctcgagcaaaagtgctt
agcaagctcaatatgaaggacaaccagctaacatctctgccactggattttgggacgtgg
accagtatggtggagttgaatctggcaacaaaccagcttactaagattccagaggacatc
tgcggccttgtgtctttagagatgcttacattgtccaacaacctgttgaaaaagttgcct
tatgggattggcaacttaaggaaactacgagagcttgatctggaggagaacaaactggag
tctctccctaatgagattgcctaccttaaggatctgcagaaactcgtattgaccaataat
cagctgacaactttgccgagaggaatcggtcacctgaccaacctgacgtacctgggcttg
ggagagaacctgctgcagcaccttcccgaggagatcggcacattggagaatctggaggac
ctgtacctgaatgacaaccccaacctgcacagtctgccattcgagctggcgctgtgcagc
aaactgtccatcatgagcatagagaactgcccgctcagccacctgccgccacagatcgtc
gccggaggcccttccttcatcatccagttcctcaagatgcagggcccctaccgcgccatg
gtctga
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