Danio rerio (zebrafish): 555504
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Entry
555504 CDS
T01004
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b
KO
K16498
protocadherin delta 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
555504 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
555504 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
555504 (pcdh7b)
Protein phosphatases and associated proteins [BR:
dre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
555504 (pcdh7b)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Protocadherins
555504 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
LYRIC
Mid2
MLANA
Motif
Other DBs
NCBI-GeneID:
555504
NCBI-ProteinID:
NP_001352582
ZFIN:
ZDB-GENE-081104-299
Ensembl:
ENSDARG00000060610
UniProt:
A0A0H2UKU4
LinkDB
All DBs
Position
7:66391409..66643191
Genome browser
AA seq
1242 aa
AA seq
DB search
MRTTGIVDYLSYCFLILQLLSQPAAKQVLRYRLAEEGPADVRVGNVAADLGITAGMDVTF
TLESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSVIGPAQSWVDL
FEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDN
GESTVRRIGTSGSGSVDSHSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDRE
QRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEADLPENSSPGAPILQ
LKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFTVMARD
RGQPPKTDKATVIINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSD
RDKGPNGIVTCTVVGDVPFQLKPASEVEGDMNKKKYFLHTSAPLDYEAVQEYNVVIVAVD
SGSPSLSSNNSLIVKVGDMNDNPPVFSKSTVEVSFPENNAPGERVVTVVALDADSGKNAE
ISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGMPVLQGSATVVVLV
ADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEENIFSIDN
NTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPTVLFPMNNS
YTLLPPSSNIRTVVRTVSATDTDTGVNANLSYRIVGGNPFKLFDMDAWTGVISLVGKLEQ
KHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLFNSTIVEAQVAKSLSTPLNADIAGDP
NYDLGKQRLSIAIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHD
KGKKPKKDKNKKKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGS
PDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSEYSS
QTINKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLP
EDAYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDACWMPVRTSPERRP
KATPPKLSTFMTSPGGSIADQPGSQETLAVANGDPSHLLGDRNRNLLNKKMASSSSSYDA
FSSAGFSASEETSRPTEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaggactacaggcattgtggactatttaagctactgctttcttattctgcagctgctg
agtcagcccgcagccaagcaagtgctccggtaccgcctggctgaggagggtcctgccgat
gtccgggtaggtaatgtagccgcggacctcggcatcacggcaggcatggacgtgactttt
acattagaatcaggctccgagtacttcaaaatcgataacatgaccggagacctcagcaca
aacgagcggcgaatagaccgcgaaaagctgccgcagtgtcaaatgatttttgatgagaac
gaatgttttatagatttcgaagtgtctgtgataggacccgcgcagagctgggttgatctc
ttcgaaggcaaagtgattattttagacattaacgacaacacgccgtctttcccctcacct
gttctcacgctctccgttgaagagaaccgacccattggcacactttatctcctgcccact
gccaccgacagagattttggtcggaatggaattgagcgatacgagttaattcaggacaac
ggcgagagcactgtcaggcgaatcggcacttccggctcgggcagtgttgacagtcactcg
ggcaagcggaggttcgacgagggagcaagccgtagcagcgtctttgaacttcaagttgct
gacaccacagacggcgagaagcagccgcagctaattatcaaaggggctctggacagagaa
cagcgcgactcctatgagctgactctgcgggttagagatgggggcgaccccccacgctcc
tcccaagccattctgagagtaatgatcacagatgtaaatgataacaccccacgctttgag
aaaagtgtttatgaggcagacctaccagaaaacagttccccaggtgcccccatactccag
ctaaaggcaggtgacactgacgttggtgttaatggacagatcgagtatgttttcggagca
gccacagagtcagtgcgacgactgctgcggcttgatgagagcactggctggctcagtgtt
ttgcaccgaattgatcgtgaagatgtgagccagcttcgtttcacagtcatggcacgtgac
cgtggtcagcctcctaaaactgacaaggcgacagtgatcataaacatcaaagatgaaaat
gacaatgtcccaaatattgacatccgaaaaattggacgcatctttctgaaagacggcgtg
gctaatgtggcagaggatgtgattgtcgatacacccattgctctcgtgcaagtgtcagac
agagataaaggaccaaacggtatagtgacatgcactgtagtgggtgatgttccttttcag
ctgaaacctgccagcgaggtcgaaggtgacatgaataaaaagaagtactttctccacaca
tcagcaccacttgattatgaagccgtgcaggagtataacgtggtcattgttgccgtggac
tctgggagccctagtctttctagcaacaattcactaatagtgaaggtgggggacatgaat
gacaatccaccagtttttagcaaaagcacagtggaggtttcatttcctgaaaacaatgct
cccggtgagcgtgttgtcacagtagtggccttagatgcagacagtggcaaaaatgctgaa
atctcctactccctggactcctctgtgaacggaatattttcaattgatgcagacacaggt
gacatccgtgtcaacaccatacttgacagggagcagacggaacgatatgagttcaaagtt
atcgccaaagacaaaggcatgccagttctgcagggctcagccacggtggtagttttggtg
gcagataaaaatgacaatgagccaaagttcatgcaggatgtgttcactttctatatacag
gaaaaccttcaacccaacagtcctgttggcatgattacagtcatggacgctgacaaaggg
caaaatgcagatatgagtctgtacattgaggaggaggagaacattttctccattgacaac
aacacaggtaccattttctcaaacatggcttttgatcgtgagcaaagaaacaattattca
ttccgtgtcaaagctgttgatggtggcgatccacctcggtctgctacggccacggtatct
ctctctgtaatggatgtaaatgacaatcctcccactgttctttttccaatgaataactca
tacacgctgctcccaccctctagcaacataaggacagtggtcagaacggtctctgccact
gatactgatacaggtgttaatgctaaccttagctacaggattgttggcggcaacccgttt
aaactgtttgacatggatgcatggacaggagtcatctcattagttggcaaactagagcaa
aagcactttggccttcatcgtttggtcgtgcaagtgaatgacagtggggttccatcccaa
agcaccaccacattagttcacatctatgtcaacgaaacgctcttcaactccactatcgta
gaggcacaagttgccaaaagtctcagtaccccgctaaatgctgacattgcaggagacccc
aactatgacttgggaaagcaacggctcagcattgccataggggtcgtgtcaggcatcatg
acagtcatacttatcatccttgtggttgtcatggcccgctactgccgtcccaagaacaag
aatggctatgaggctggaaaaaaagaccacgaggacttcttcacacctcaacaacatgat
aaaggcaagaaacccaagaaagacaagaataagaaaaagtctaaacaacctttatacagc
agcattgtaaccgttgaggcatctaagccaaatggacaacgctatgatggcgtcaacgag
aaactgtcggacagtcctggaatgggccgatatcgctcggtcaacggtggccctggaagc
ccagatcttgctcgccattacaaatccagctcacccttgcccacagtgcagctgcatcct
cagtcgcccacggcgggaaaaaagcaccaggctgttcaggacctgccaccggcgaacaca
tttgtcggcactggagataacatatccatcggatcagaccactgttctgagtacagcagc
caaaccatcaacaagtacaacaaacagccgttccgccgagtgaccttctcggtggtgagc
caaccccaggacccgcaccagggctcgctgcagagttgctacgacagtggcctggaggag
tcggagacgcccagcagcaagagctcgtccggccccagactaggtgccctccctctaccc
gaagacgcctatgagaggactacgcccgatggcagtgtcggtgaggcagagcatatggaa
aatgactctcggcccctgcctgacgtagctatgacgggcaaatgcacgcgggagtgtgac
gaatacggccactcggatgcctgctggatgcctgtgcgcacctcgcctgaacgcaggccc
aaggccacccctcccaaactctccaccttcatgacctcccccggaggcagcattgctgac
cagcctggcagccaggagacactagctgttgccaacggtgacccctcacatctgctgggc
gaccgtaaccgtaatctcctgaacaagaagatggcatcctcctcctcatcctacgacgcg
tttagttctgctggattttccgccagcgaggaaacatctcgcccaactgaggagatcccg
ctagcgcctacgggtgaatacaagccgacgcaatgcggaactctgaccaggcgggaagtt
tacctgtaa
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