Danio rerio (zebrafish): 555627
Help
Entry
555627 CDS
T01004
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 precursor
KO
K22661
calsyntenin 3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
555627 (clstn3)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Cadherin related
555627 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
555627
NCBI-ProteinID:
NP_001410805
ZFIN:
ZDB-GENE-100921-73
Ensembl:
ENSDARG00000073883
UniProt:
A0A8M9PFP2
A0A9V2TXN1
LinkDB
All DBs
Position
16:complement(12105502..12173612)
Genome browser
AA seq
956 aa
AA seq
DB search
MARMSFLSFLLFCLTSVAHGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPGGSGSAQFEAVVLDRSTGEGLVRSKEPLDCESQKEHSFTIQAYDC
GEGPDGTNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEAVDADCS
PQYSQICFYDIITPNVPFTIDNDGNIKNTEPLDSKRQRVHSFWVTAFDCGKNRAQADAQV
IVTVKPSCKPGWIGWTKRIEYTPGSGSIPLFPNLHLETCEETVWNIQATVELQTSHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPATNWTAALPTLPSSDSSLVFSFNGSTHVAV
VPDSVASAVSGDHFTLQLWMRRGGASTQPPANQARGTRKEEETIVCSTVKNDDSYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPHQRLVIGACWEPEEKPKDIVNNTMPENKDTGKFVSGYKGLLSGVTVRP
GNVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFSEESCLSLRQLEGYLVVLQPDAPQISLSGVGPHLAR
PAAEFEGPQGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NTEREELLVDMESLRERGLDIINTTAYIAITGAESISVYEDVLRSIHYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHTGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGGGKEGGNQWDDSALT
IIVNPMETYENRMGITTDMEGECEDEEEVVDSPDDTSDDQRIIIKKEGRDSAPRRY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatgagtttcctatcctttctcctcttttgcttgacttcggttgcccatggc
aacaaagccaataaacacaagccatggatcgagacggagtatcaaggcatcgtcatggaa
aacgacaacactgtccttctcaacccacctctgttcgccctggataaagacgcacctctg
cactatgcaggggagatctgtgggtttagggttcacaatggaccaggtggttctggttcg
gcgcagtttgaggcagtggtgctggatcgctccactggggaaggtctggttcgatccaaa
gagcctctggactgtgaaagccagaaggagcacagctttaccatccaggcgtatgactgc
ggtgaaggtcctgacggcaccaacagcaagaaatcccacaaggccaccgtgcatgttcgt
gtcaatgacgtgaatgagttttctcctgtgtttgtggagcgccggtatgaagcgtcagtg
ccagagggtcgtctgtttgatcgtatcgtgcgagtggaagctgtagatgccgactgctct
cctcagtatagccagatctgcttctatgacatcatcacacccaacgtcccattcaccatt
gataatgacgggaacataaagaacacggagccactggactccaaacggcagcgtgtgcac
agtttctgggtcacagcatttgactgtgggaagaatcgagctcaggctgatgctcaggtc
atagtcactgtcaaaccttcctgcaaaccaggctggatcggatggacaaagcgcatcgag
tacactcctggctccggtagcatccctctgtttccaaacctgcacctggagacctgtgag
gaaacagtctggaacatccaggccaccgttgagcttcagaccagtcacatcgggaagggc
tgtgacagagacagctactccgaccgctctgtgcgcagactctgtggtgcagtgagaggt
gaagtggacctcctgccaccaccatctcctgcgaccaactggacagctgcgctgccgact
ctgccctcctccgattcttcgctggtgttttcttttaacggctccactcatgttgctgta
gtgcccgattcagtggcttcagcagtgtccggcgatcacttcaccctgcagctatggatg
agacgaggaggagccagcactcagccaccagccaatcaggcgagaggaacccgcaaagag
gaggagactattgtctgcagcactgtaaagaatgatgactcgtactctcactactctcta
tctgttcatggctgtcgtctgtctctcttctactggccggatgtgtccgccgccagaccc
gtcaaattcctctggaaactggagcaggtgtgtgacagcgagtggcatcatctgtctctg
agtgtccagttcccctctgtcaccctctatgtggatggtgtaacgtttgacccggctctc
atccacgacaacggagccattcccaaccccgcaccacaccagcggctggtcatcggagcc
tgttgggagccagaggagaaaccgaaagacattgtgaacaacaccatgccagagaataaa
gacacaggaaagttcgtcagtggttataaagggcttttgtcaggcgtgacggtgcgtccg
ggaaatgtggagccacacagtgttgtggagtgtctgtatgcctgtcgagaggggctggat
ttcggagaccttgagactttgggctcaggcatgaaggtgcatgtgaacccgagtcagtca
gtgctggtgttagagggagacgacattgaaagcttcaaccgtgccgttcagcaggtgaca
tacagaaactctctacgattcgccactcctggtgtccgaccactcaaactcaccacctct
ctcaggtgtttcagtgaggagagttgtctctctctcagacagctggagggttacctggtc
gttctccagcctgacgcacctcagatctccctctccggggtgggaccccatctggcccgt
ccagctgctgagtttgagggtcctcaaggggttcccttgttccctgagctccgaatcgtc
tgctccttgtctcacgctgtgaacacagctgctcagggcatggagggaggggcgctgatg
tcagacgccgtcgctcacactctggatgggtgtgaagtccagcccttgggggaggagcta
aacactgagagggaggagcttctggttgacatggagtctttgagagagagggggctcgac
atcatcaacacaacggcctacattgccattactggtgcggagtctatctctgtgtatgag
gatgtgctacgctctattcactatcgcttagcaaagggctcagctcgttttgaacgaagg
tttcgtctgtcgtgctcagaaatgaatggtcgctacaccagtaatgagctcacattggag
gtaaacttcctgcactctctggacagtctctaccacccgtctcacctgctggcatctcag
cagcagttcctccatccatcccatcacactggagaactgagcggacacacgcttcccaac
ccacaccgcaactcagtggttccaggagctgccactgtcatcatcatggtgtgtgtgggt
ttcctggttgtcatggtgattcttggagtttttcgcattcgctccatccaccgccgtggt
gaaggagcaagaggtggaggcaaggagggcggtaaccaatgggatgattcggccctcacc
atcattgtgaacccaatggagacatatgagaaccgtatggggatcacaacagacatggaa
ggagagtgtgaggatgaggaagaagtcgtggattcacccgatgacaccagtgatgaccag
cgaatcatcatcaagaaagagggaagagactccgcccctaggcgctactga
DBGET
integrated database retrieval system
