Danio rerio (zebrafish): 555770
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Entry
555770 CDS
T01004
Symbol
zc3h18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18
KO
K13092
nuclear protein NHN1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
555770 (zc3h18)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
General mRNP proteins
555770 (zc3h18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
555770
NCBI-ProteinID:
NP_001037804
ZFIN:
ZDB-GENE-050419-13
Ensembl:
ENSDARG00000062506
UniProt:
Q1LUE5
LinkDB
All DBs
Position
18:complement(17079186..17147607)
Genome browser
AA seq
1148 aa
AA seq
DB search
MDTPESPTQSPQSPEEEEKGLSDNELLESPESPAEADKGVSDSELLNDDENEVPEHGGDS
DSEDRDRQPAGREDPEELSDVEDYKLDREEREDIHQQEGALRVQEIAQKAIKSPEEEILE
TPRSPDPVSPAAEHERPFTPAEEERGDDDEEEEEDETTTKSGLGQAELEEEEDEEEERRR
RRRAAMVVSDLKDESSVSRDLDEHELDYDEEVPEEPSAAAPEEDEPEKPAVGEDGEDEEE
EDEEEEKRRKRKERKPILPPDNRDTPLRKSEDSREGGRRDSFRDKKKEEDDGEIDEGEID
DDDLEEGEVKDPMDRKIRPRPICRFFMKGSFVTMYGNVKFFFFKSYLVFLTGNCTWGMIC
RFIHPGVNDKGNYSLISKPDPFSPNGAPPGGAAGGGPHPLMPANPWGAPAVEELPPPPPP
LDPPVESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIGEDDRDFDKENDFFRERG
GYRITREIRDAGSDPYGDPYYDYEMEAFWRGGQYENFRVQYTETPLPYYPDRERERDPRE
RHRERERERERDHRERERRQREREREREREREKDSRRRKDEWDRDRLKRDEKEGRPRERP
LREPREKKDEKEKTLKPRSPTNMPPRGPMEPPTKKDMLSVTKRPDEWNDPWCRSKSPRRR
PGFMGSPPRGRRRHRPSGSSVSLSNSSRSSSRSSSFTGSGSSRSRSRSRSSSMSSYSSHS
SQHSSFSGSRSRSGSFSSSPSPSPSAQRNANKNKAEQPPAAAKGPPLKPGALPPPRRDKG
PPKVMPSPSLPEQPGKPPKPITETVKPPNPRPPGRPPGPREPREPPNMREGRKKERQQHN
PPRRRTVSGSVSGSSYSGSSSRSRSRSSSASASRSGSHKSRSLSVSSVSSVSSASSSSSS
VRSADSDDMYADLASPVSSASSRSPTPGHPRKDRGPPRERGPNKERGKPPKKDEPFKDER
KRVDPSGLPSKASSDMPRSGNRGHPMHPPPMGPPGGYGSHKDIKLTLLNKQQTDRSNRKR
YFPSDKERPPSPLRKRMAMSPDGGRDRRMPGRPPMSPRMERPKGQGPRPMPSQGERKRPL
SPPAKSSGKGPAAASAAKPPAPGAGSGSASGSAPGKPSSTLSRREELLKQLKAVEDAIAR
KRAKIPGK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggatacacctgagagcccgacccagtccccgcagtctcccgaggaggaggagaagggt
ctctctgacaatgagctgctggagtcgcctgagtccccagcagaagcagacaagggagta
tcagacagtgagctcttgaatgacgatgaaaatgaagtcccggagcatggaggagactca
gactctgaggacagagacaggcagcctgctggccgagaagatccagaggagctttcggat
gtggaagattacaagttggaccgggaggagagagaagacatccaccaacaagagggtgct
ttgagggttcaagaaatcgcgcagaaggctatcaagtctcctgaggaggaaatcctagag
acgccaagatctccagatcctgtttcgccagcggcagaacatgagcgaccatttactcca
gcagaggaagagcgaggagatgatgatgaggaggaggaagaagatgagacgacaaccaaa
tccggccttggccaggcagagcttgaggaagaggaggatgaggaagaggagagaaggcgg
cggaggagagcggcgatggttgtgagcgatctgaaggatgagtcttctgtgtccagagat
ctggatgaacacgagctggattatgatgaagaggttccagaggagccgagcgctgctgct
cctgaggaagacgagccagagaagcctgctgtaggggaggatggagaagatgaagaggag
gaggacgaagaggaggaaaagaggcgcaagaggaaggaaaggaaacccattctgcctccg
gataacagagacacacccctgagaaaatctgaggactcgagggaaggagggaggagagat
tcgttccgtgataaaaagaaagaagaggatgatggagagatcgatgagggagagatagat
gatgatgatcttgaagaaggagaggtgaaagaccctatggatcgaaagatcagaccccga
cccatctgcaggtttttcatgaaaggtagttttgttacaatgtatgggaatgttaagttt
tttttttttaaaagctaccttgtttttctgacaggtaactgcacatgggggatgatctgt
agatttatccatccaggagtcaatgataaaggcaactattcactcatctccaagccagac
cccttctctccaaatggagcccctccgggaggagcagcaggtggcgggcctcaccccctt
atgcctgctaacccctggggagctccggctgtggaagagctgcctcctccacctcctcct
ctagatcctccagtggagagcgcctgggaacgaggccttagacatgccaaagaggtgtta
aaaaaagccaccatacgtaaagagcaggagccagattttgaggaaaaacgtttcaccgtg
accatcggcgaagatgatcgagatttcgacaaagaaaacgacttcttcagggaacgcggt
ggttatcgcattactagagagatcagagatgctggtagtgatccttatggcgacccatac
tacgattatgagatggaagctttttggcgaggaggccagtatgagaattttcgagtgcag
tacaccgagacacctctgccctactatcctgaccgagagcgggaacgagatccacgtgag
cggcaccgtgagagggagcgggagcgtgagagagaccaccgtgaacgggagcgcagacag
agagagcgagagagggagagagaacgggaacgggagaaggacagccgacgtaggaaggat
gaatgggacagggatcgtctgaaacgagacgaaaaggagggaaggccgagagaaagacct
cttcgagagccaagagagaaaaaagacgagaaggagaagacgctcaaaccacgatcgccc
acaaacatgccaccaagagggccaatggagccaccaaccaagaaggacatgctctcggtg
accaagaggccagatgaatggaacgacccctggtgccggtctaagtctcctagaagacga
ccaggcttcatgggctctcctccgcgtggccgtaggcgacataggccatctggatcatca
gtttccctttccaattcatctaggtcttcatcccggtcctcatcattcacgggttctggc
tcttcccgctctcgatctcgttcacggtcatcttcgatgagttcctactcaagccactct
tctcagcacagctccttcagcgggagccgctctagatcgggatcattttcatcttcaccc
tctccgagcccctcggcacaaagaaatgctaacaagaacaaagctgaacagcctcctgct
gcagcaaaaggccccccgttgaagcctggtgctctgccacctcctcgcagggacaaaggg
cctcccaaagtgatgcccagcccatcattgcctgaacagccagggaaaccacccaagcca
attacagagacagtaaaacccccaaacccccgtccacccggaagacctcctggcccccga
gagcccagagagccacccaatatgagagaaggacgcaagaaagaacgacagcagcacaac
ccacctcgcaggcgaacagtgagcggcagtgtaagtggcagcagttattctggctccagc
tcacgctcaagatctcgttcctcctctgcctcagcctcccggtccggatcccacaagtct
aggtctctttcggtcagcagtgtgtcgtcggtctcctcagcctcctccagcagtagttcg
gtcaggagtgccgactctgatgacatgtatgctgatttggccagtccagtgtcctccgcc
agctcccgttcacccacaccaggacatcctcgcaaggacagaggccccccacgggaaagg
ggccccaacaaagagagaggtaaaccaccaaagaaagacgagcctttcaaagacgagcga
aagagagtggacccatccggtctcccatccaaagccagttctgacatgcctagatctgga
aaccgaggtcacccaatgcatccaccgcccatgggtcctccaggaggatatggctctcat
aaggacatcaagctcaccctgctcaacaagcagcaaaccgacaggagcaataggaaaagg
tactttccttctgataaagagagacccccttcgcctctccgcaagaggatggcgatgtca
cctgatggaggtcgagacaggagaatgcctggacggcccccgatgtctcctagaatggag
cggcccaaaggtcagggtcctcgcccgatgccgtcacaaggagaaaggaagcgtccttta
tctcctccagccaagtcttctgggaaaggtcctgctgctgcatctgcagctaaacctcct
gcacctggcgctggatccggctctgcttctggttctgctccgggcaaaccaagcagcacc
ctttcacgccgcgaggagctcctaaaacagttaaaggctgtggaggacgccatagcccgc
aaacgggccaaaatccctgggaaataa
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