Danio rerio (zebrafish): 555839
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Entry
555839 CDS
T01004
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
555839 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
555839 (lrfn5b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
fn3
LRR_9
V-set
Sp38
DHU1_N
C2-set_2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
555839
NCBI-ProteinID:
XP_683575
ZFIN:
ZDB-GENE-080327-20
Ensembl:
ENSDARG00000079396
UniProt:
F1RE98
LinkDB
All DBs
Position
20:54384212..54407672
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AA seq
765 aa
AA seq
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MEMLLVYLMVVVMALKAQKIQVCPKRCICQVLPPNLATLCDKKGLLFVPPNIDRRTVELR
LGDNFITGIKRKDFANMTKLVDLTLSRNTIGSVAPHAFNDLENLRALHLDSNRLTHITND
TFSGMSKLHHLILNNNQLTYIHIGAFNDLLALEELDLSYNNLEGAPWIAIQLMISLHTLN
LDHNMINYIPEGTFSGLQKLKRLDVTSNKLHKLPPDPVFQRAGVLATSGVLGASTFALSF
GGNPLHCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQEMR
ALEGQQVSLRCKARGDPDPIIHWVAPDGKLVFNSSRTVVHTDGTLEILISTVKDSGSFTC
VASNPSGEAQQTVDLLITKLPHFTNDTSLAPEPDPGSSDIATSAKTADGGPSIGNTKGGQ
EKRVLISEITASSALVRFNFQRNIPGIRMFQVQYNGTYDDSLVYRMIPPTSKSITVNNLA
AGTMYDLCVLAIYDDALTTLTATRVVGCVHFSTDPQYMRCHFMQSQFLGGTIVVIIGGVI
VASVLAFIIFLIVRYRVCQPDGSEKAVELGVIRSQSETLQVCGVIKSMSKQVLGLERDAC
RKVSPQNESARASKPAFPDCTVSTSAGTHSWHPASPSPLRHTPDTQINVEPENTNKNNSA
KARPAVRAYSTMVTPVSRRAQLQSLHHYQTVPVGCVRVSRRHSLNVDSCKQPANQSATYP
SAALQRSKRSLSMSGGDIPQMDSGGNKRSGKSSLSQSEWVLESTL
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctactggtttatctgatggttgtggtaatggcattaaaagcccagaagata
caagtatgtccgaagcgttgcatctgccaggtgctgccgccgaatctggccacgctgtgc
gataagaaaggtcttctgttcgtccctccaaacatcgacagacgcactgtggagctccgg
ctgggggataacttcatcacgggcatcaaacgcaaagatttcgccaacatgaccaaactg
gtggacctgacgctctccaggaacacgatcggctcggtcgcaccacacgcttttaacgac
ctggagaatctgcgggcgctccacttggatagtaatcgattgactcacataacgaacgat
acgtttagcggaatgtccaagctgcaccatctgatcctcaacaacaaccagctgacgtac
atccacatcggagcgttcaacgacctcttggctctggaagaactggatttgtcgtataat
aatctggaaggcgcgccgtggatcgctatacagctgatgattagcttgcacacgctaaac
ctggatcacaatatgatcaactacatccccgagggtacgttctccggcctgcagaagctg
aagcggctggacgtgacctctaataagctgcacaagctaccgccggatccggttttccag
cgtgcgggcgttctggccacctcgggggttctgggcgcctcgacttttgctctgagtttc
gggggtaatcctctgcactgtaactgcgagctgctgtggttgcggcgactgcggcgcgag
gacgatctggagacctgtgcggcaccacaacatctcgccggacgatacttctggaccgtc
tctgaggaggagttcctgtgtgagccgccgctcatcactcgacactcacaggagatgcgt
gcgctggagggccagcaggtgtctctgcgctgtaaggcccgcggggacccagaccccatc
atacactgggtggccccggacgggaagctggtgttcaactccagccgtactgtagtgcac
actgacgggacgctggagatcctgatcagcacagtgaaggattcgggctccttcacctgc
gtggcctccaacccatccggagaggctcagcagacggtggatctgcttatcaccaaactc
ccacacttcaccaacgacaccagtctggccccagagccggacccaggctcctcagacatc
gctacttcagccaagactgccgacggagggccctcaatagggaacactaagggtgggcag
gagaagagggtgctgatctcagaaatcactgcatcttcggctctggtcaggttcaacttc
cagaggaatattcccggcatcaggatgttccaggtccagtacaacggcacttacgacgac
tccttagtctatagaatgattcctccgactagtaaaagcatcacggtcaacaatctagcg
gcgggcaccatgtacgacctctgcgttctggccatctacgatgacgccctgaccacgctc
acagcgacccgtgtggtgggctgcgtgcacttctccaccgacccgcagtacatgcgctgc
cacttcatgcagtcgcagttcctgggcggcaccatcgtggtcatcatcggtggcgtaatt
gtggcgtccgtgctggccttcatcatcttcctcatcgtgcgatatcgagtctgccagccg
gacggctctgagaaagcagtggagctgggcgtcattcgctcacagtccgagacgctacaa
gtctgcggcgtcatcaagtccatgtccaagcaggttctaggactggagcgcgacgcatgt
cggaaggtgtcgccgcaaaacgaatcagcgcgagcttcaaaacctgcgtttcccgactgc
accgtcagcacgtctgcaggaacccacagctggcacccggcgtccccgagtccactgcgc
cacactccagacacacagatcaacgtcgagcccgaaaacaccaataagaacaactcggct
aaagcacgtcccgctgttcgcgcatattcaacgatggtgactccggtttcaaggcgagcg
cagctacagagtctgcaccactaccagacagtgccggtgggctgtgtacgggtcagccga
cggcactccctgaacgtagactcctgcaaacagcctgcgaatcagagcgctacgtatccc
tccgccgcgctgcagcgctccaaacgcagcttatccatgagcgggggagatatcccgcag
atggacagcggcgggaacaagcgcagcgggaaatcctcgttgtcccagtcggagtgggtt
ctggagagcacattataa
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