Danio rerio (zebrafish): 555906
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Entry
555906 CDS
T01004
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dre03029
]
555906 (ppargc1b)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
555906 (ppargc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
555906
NCBI-ProteinID:
XP_009289336
ZFIN:
ZDB-GENE-030616-43
Ensembl:
ENSDARG00000101569
UniProt:
A0A8M3AP47
LinkDB
All DBs
Position
14:29207775..29270112
Genome browser
AA seq
848 aa
AA seq
DB search
MADCASLLDEELSSFVFNYLTENSGSQYGEEEVCSDRLDADFPDFDLSQLDASDFDSVNC
LSELHWCNEQSDHSPASIQYSAGDPELFEEENAALLAALTDSLDGIVEDGVGGLSVFPSL
GDEPEEGEEEEDDLPMESEPLPGSMSPETEDPSLLKKLLLTPPNVPVGLESHKDSGVHRH
SSRNQHVKPVRPVLKKDKSSTQERKPRPVRPSGRLCTELHRHLTTARDNEDTPSADTEEE
EEEEDSESEEEEEEESSSSEGESVVCIEPAKPQFSSEKELHSVVELIKYMHTYCLPVRKQ
ASWDRKEREALARKAKPEHSQIPRPPPTSQKPASQTRPRMPFCRRREIKAHSLLKELLEA
VSSFDVSKPYRMHSPPYIHSRGAAIRPAVDVSSSPPRQPKAEPKDSDCESWQKAAKRPKS
PEPEEGSFSVRRSRRLASFPSRFAKRVRVNCGRTEQCSEEEITVKHPPTDTESSQKSSSY
KPSETHNNPCCSDEKRSCLCLPLATKSNGDTQYANKPFEQTLCMELCGTAGLTPPTTPPH
KPVEDELFKPDAKADLSTKSSCLMRANMRKLPEQTELYAQLRRMGQTGDIDSKGGTQRAY
GDHDYCLMGLGESRKTTAVLNGSQCHVEVKEKDEEEEMEMDVEKEEMEEKEEERVLTDCQ
QRTEVNSLVELPSPEETSEHSPVRSPSPELDAQSPVSCSPPSPSCKLSFSDESSETCHGA
NEKRSKTKCGQENDGNKCQVIYIHNLPSSVTQTMLRKRFEAFGHPEDCKVVIKKEERCGV
ITLRHTQNGQTSRHRWDLLGPSGGNGSRRFGRKRYIDLDEAGPGPVKSKYDALDFDALLK
EAQRSLHR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgcttcactgttagatgaggagctctcttcatttgtcttcaattacttg
actgaaaactctggaagccagtatggggaagaggaggtctgctcagaccgcctggatgct
gacttccctgactttgacctctcgcagctggacgccagtgattttgactcagtgaactgc
ctcagtgagctgcattggtgcaatgagcaatcagatcactcccctgcctccatacagtac
agcgctggagacccagagctattcgaggaagaaaatgcggccctgctcgctgccctcaca
gacagcctggacggcattgttgaggacggagtcgggggtctgtctgtgttcccttccctg
ggggacgaacctgaggagggcgaagaggaggaagatgacctccctatggagagtgagccc
ctccctggctcaatgagcccagagacagaagacccatctctactgaaaaagctcctgttg
acaccccctaatgtgcctgtgggcctcgagtcgcacaaagacagtggcgttcatcgtcat
agcagtaggaaccagcatgtcaagcctgtgaggcccgtgctaaagaaggacaaatcaagc
acacaggagcgtaagccgcggccagtgaggcccagcggtcgtctttgcactgaactccac
cgtcacctcaccacagcacgggacaatgaggacacaccgtcagccgacactgaggaagaa
gaagaggaagaggacagcgagtcagaagaagaagaggaagaagagtcatccagcagcgag
ggggaaagcgtggtctgcattgagccagcaaagcctcagttctcctctgagaaagaactg
cactctgtagtcgagctcatcaaatacatgcacacgtactgcctgcctgtacgcaaacag
gctagctgggatcgcaaagaacgcgaggcattagcacggaaagccaaacctgagcactca
cagatccctcgaccccctccgacctctcagaaacctgcttctcagaccaggcccaggatg
ccgttctgtcgacgaagggaaatcaaggctcattcactgcttaaggagcttttagaggcc
gtcagctcgtttgatgttagtaagccttataggatgcacagccctccttatattcacagc
agaggagctgccattcggcccgctgttgacgtttcttcttctcctccacggcagcccaaa
gctgaacctaaagactcagactgtgagagttggcaaaaggctgcaaagaggcctaagagc
ccagagccagaggaagggtcattttctgtcagacgctcacgacgactggcttcttttcct
agccggtttgctaagagggttcgtgttaactgtggccggacggagcaatgcagcgaagag
gagattacggtcaaacatcctcccactgacactgaaagcagccagaagagcagctcctac
aagccttctgagacccataataacccatgctgcagtgacgagaaacgctcctgcctctgt
ctgccgctggcaaccaaatccaacggagacacgcagtacgccaacaagccctttgagcag
actctctgtatggaactgtgtggcacagcaggcctgactccccccaccacacctccccat
aaaccagtggaagatgagctcttcaaacccgacgcaaaagcggatctcagcaccaaaagc
tcatgcctgatgcgggctaatatgcgcaaactccctgaacagacagaactgtatgcccag
ctgcgccgcatgggtcaaacgggggatatagactctaagggtgggacgcaacgtgcttat
ggggaccatgattactgcctgatggggctgggagagagtcgtaagacaacagcagtgcta
aatggctctcagtgccatgtggaagtgaaagagaaagatgaagaggaagaaatggagatg
gatgtggagaaagaagagatggaagaaaaggaggaggagagggtattaacagactgccag
caaaggactgaggttaattctctggttgagctgcccagtccagaggagaccagtgaacac
tcacctgtccgatctccaagcccagagctggacgcccagtcgccagtgtcctgttcacct
ccttcccccagctgcaaactctccttcagcgatgaaagctcagagacgtgtcatggagca
aatgaaaaaaggagcaagacaaagtgtggacaggaaaatgatgggaacaagtgccaagtg
atctacattcacaaccttccaagcagcgtgactcagaccatgctgcgcaagcgcttcgag
gccttcggccatccagaggattgtaaagtggtcatcaaaaaagaggagcgttgtggagtg
atcacactgaggcacactcagaacggccagacctcacggcacaggtgggatttgctcggt
ccgagtggcggaaacggcagtcggcggtttggcagaaagcgttacatagatctggatgag
gcaggtccaggtccagtgaagagcaagtatgatgcactggactttgatgctctgctgaaa
gaagctcagaggagcctgcatcgctga
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