Danio rerio (zebrafish): 555941
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Entry
555941 CDS
T01004
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
555941 (cacna1ba)
04020 Calcium signaling pathway
555941 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
555941 (cacna1ba)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
555941 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
555941
NCBI-ProteinID:
NP_001108020
ZFIN:
ZDB-GENE-060531-44
Ensembl:
ENSDARG00000021735
UniProt:
A2BHF4
LinkDB
All DBs
Position
5:complement(29295730..29488829)
Genome browser
AA seq
2312 aa
AA seq
DB search
MARFEDDLPTRYGGGGGGSPAGPGRGATRQPGPPGGPRVYKQTMAQRARTMAIYNPIPVK
QNCLTVNRSLFIFSEDNIIRKYAKKITECPFEYMILATIIANCIVLGLEQHLPALDKTPM
SKRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTIVGPDF
DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYM
GKFHRTCFRTDTGEQVDEFPCGLESPAWTCENGTECREYWIGPNFGITNFDNILFAVLTV
FQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE
KRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEDKDDVAWYKRKCNNPVLKR
AKKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKIESLSYFRRKEKRFRFFIRR
MVKAQSFYWTVLCIVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAISKKLALQKAKEVKEVSPMSAANISITAFIRPNPGALSCSSSNSSSHSP
KEQQRSLKMMSVWEQRTTQIRKHMLASSEALYQEELNPRLMSNLPLRTDIKTHLDRPLVV
EPRCDGPISPHSGWDKPQDLQGEGSTPEERVPPVFEPPQSHPPRKHHRHRERLSNETNEN
GDTGHAKEGRHHVHHSRSKEHDGTRCKEGKGDRSRSREGGRRHHHQSSVDEGVGGGEREH
RHHHSHRHNREGNGVVSAGGKSERRSRQKEGSRSGTREGERCSRGENGGNGGRRRHRPRT
SKAQSTLEGEEQHVNGEEEGKHMDMGGDSMAVNPHQPSVGSRWCLEKPEDSDNKRNIGQT
GGMSTHIPVTVTSPPGETTLIPMNSIDSETVPMTEKNLEDLNQSSIRPILPFSSMFIFNP
TNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFT
FEMVIKMVDLGLILHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDISTIKSLRVLRV
LRPLKTIKRLPKLKLFKGKFFYCTDESKGLEKDCRGLFLDYDKDDVTAQPREWKKYEFHY
DNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFV
NIFVALIIITFQEQGDKVLSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKFV
VSPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKYLNIVFTVLFSLECILKIIAFGPL
NYLKDAWNVFDFVTVLGSITDILVTEINERQLNFSFLRLFRAARLIKLLRQGYTIRILLW
TFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNDDTAINRHNNFRTFLQALMLLFR
SATGEAWHDIMLSCLSERTCDPSSGTLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIM
DNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKKCPP
RIAYKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVW
PNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQLKEQAGPGSQN
KVSALLEPILPLTHMQDQPVNGVDSASECQAQTRPSSTTLNNGRTTLDNTIKGSSSWASE
KSKEVQKSKRRPMSRGQSEDASNANTAQESVEMRKMENSANTVTSGGLEGQGRAASMPKL
NAEMQRSHSRQSPGTLLEPIPDSPMRRSASTFAPQRPHEVNLNDYILEKPVQERHHHHHH
HHRCHHRRDRDKKQRSLDRSPTGHHKTTGTATDSVEERAHDRGRSHERKHHSSSGEKQRY
YSCDRYASREHCSSKSAVASCATSPSETQEANLNKQGSGWAKGSPVLLTSGASTPSRGRR
QLPQTPLTPRPSVAYRTANSSPVQLLATTTSLLPPSPGRLSRGLSEHNALLLSGSISSSP
APVSRINSEPFLGPPDHPAGLQPEAFAVFQENPSPQMGRSPQTVGMPFVAIPPPPPQQFR
RVPNGYHFSTGPSASRGRAQQYYPEAEVEDWC
NT seq
6939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagacgatctcccgacccggtatggaggcggcggtggtggctctcca
gcggggccaggcagaggggccacccggcaaccaggccccccgggcggaccgagagtgtac
aagcaaacaatggcccaaagagccaggacaatggctatatacaacccgataccggtcaaa
cagaactgccttactgtcaaccggtccctgttcatcttcagcgaagataatatcattcgg
aaatatgcaaagaaaataacagagtgtccatttgagtacatgattctcgccacaatcata
gcaaactgcattgtgttgggcttagaacagcatttaccagcgttagacaagacacccatg
tcaaaacggctggatgacactgagccctacttcatcggaatattttgctttgaggctggg
atcaagatcatcgctctaggttttgcttttcataaaggctcctacctccgcaatggctgg
aatgttatggattttgttgtcgtgttgacgggaattctaaccatagttgggccagacttt
gatttacggacactcagggcagtgagagtcttgcggccactcaaactcgtgtctgggatt
cctagtctccaagtagttctgaagtccatcatgaaagcgatggttcctttgcttcagatc
ggccttctgctcttctttgccatccttatgtttgctatcatcggtctagacttttacatg
ggcaagtttcaccgcacctgcttcagaacagatactggggaacaggtggatgaatttcca
tgtgggctcgagtcgccagcctggacgtgtgaaaacggcactgaatgtagggaatactgg
atcggcccaaacttcggcattactaactttgacaacatcctcttcgctgtgctcaccgtc
ttccagtgcatcactatggaaggatgggtggacatcctttacaatgccaacgatgcctca
gggaacacctggaactggctctacttcatcccactcatcatcatcggctccttcttcatg
ctcaacctggttctgggtgtgctgtcaggggagtttgcaaaggagcgagagcgtgtggag
aaaagacaggagttcttaaagctgcgcagacaacagcagatcgaaagagagttaaccgga
tacctggagtggatctgcaaggcagaggaagtaatgcttgctgaagaagataaaaatgca
gaggacaaggatgatgttgcctggtacaagaggaaatgcaacaacccagttttgaagcgg
gccaagaagagcaaaaatgacctcatcaatgcagaggaaggagaagatcactttactgac
atctcttcagttgctccccaaggctctccattcacccgcacaagtgtgaagagcagcaag
attgagagcttgtcgtactttcgcagaaaagaaaagaggtttcgcttcttcatccgccgc
atggtgaaggctcagagtttctactggactgttctgtgtatagtgggactgaacacactg
tgtgtggccatagtccactacgaccagcccgaatggctcacatatgcactgtatttggcg
gagtttgtgttccttggtctgttcctaatagagatgagtctgaagatgtatggcctcggg
cccaggacttactttcactcttcatttaactgctttgactttggggtgattgtggggagc
attttcgaggtgatctgggctgcagtaaagccaggagcttcctttggcattagtgtgttg
cgagctcttcgtttgctaagaatattcaaggttaccaagtattggaactcattgaggaat
ctggtagtgtctctgctcaactcaatgaagtccatcattagtctcctgtttctgctgttc
ctcttcatcgtggtgtttgctctgttgggaatgcagctctttgggggacagtttaatttt
gaagacgagaccccgacaaccaactttgacacattcccagctgctatcttgacagtgttt
cagattttgactggagaggactggaacgctgtgatgtatcatgggattgaatcgcagggc
ggagtgcaccggggaatgttctgctccgtgtacttcatcgtgctcacgctgtttggaaac
tacactctcctcaatgtctttttggccatcgctgttgataaccttgccaatgcacaagaa
ctcaccaaggatgaggaggagcaagaggaggctatcagtaagaaactggctctacagaaa
gccaaggaggtaaaggaggtcagccccatgtcggcagctaacatttccatcacagctttt
ataaggccaaaccctggtgctctttcatgcagctcctccaactccagctctcattcacct
aaagaacagcagcgttctctaaaaatgatgtccgtgtgggagcagcgcaccactcagatc
cgaaagcacatgctagccagcagtgaggcgttgtaccaagaagagctcaatccacggctc
atgtctaaccttcctctacgcaccgacataaaaacccacctggaccggcctttggttgtg
gagcctcgctgtgatggccccatcagcccacacagtggctgggacaaaccccaggatttg
caaggcgagggcagcacaccagaagaacgagtcccacctgtattcgagcctccacagtca
catccaccacgcaagcaccaccgtcacagagagcgtctttctaatgagaccaatgaaaat
ggagacacgggtcatgccaaagaaggccggcatcacgttcatcacagccgaagtaaagag
catgatgggacacgttgtaaggaggggaagggtgacaggagccgaagcagagaaggggga
cgtagacatcaccatcagagctcggtggatgagggcgtaggaggtggagagagggaacat
cggcaccatcactcccataggcataacagagagggcaatggtgtggtcagtgctgggggg
aagagtgaacggcggtccaggcagaaagagggctcacgatcagggacaagagagggagag
agatgctcaaggggggagaatggaggaaatggagggaggaggcgacacaggccacgaacc
agtaaagctcagtctacgctggaaggagaggagcaacatgtgaatggagaggaggagggc
aagcacatggatatgggaggagattcaatggctgtaaacccccatcaaccttcagttgga
agccggtggtgtcttgagaaaccagaagattcggacaacaaacgaaatattggtcagact
ggaggaatgagcacccatatacccgtgactgtcacttctcccccgggagaaacaaccctt
attcccatgaacagtatagacagcgagacagtgcccatgactgagaagaatctagaagat
ctaaatcaaagcagcattcgtcccatcctccccttcagctccatgttcattttcaaccca
actaatccggtgagacgtttatgccactacattgtgagtctgcgctattttgagatgtgt
atcctggtggtcattgccatgagcagtatagccctggctgcagaagacccggtccaagcc
aatgcacctcggaacaatgtcctgaagtatttggactatgtcttcactggtgttttcaca
ttcgagatggtcattaagatggtggatttaggtttaattctgcatcctggttcctacttt
cgagatctatggaatattttggacttcattgtggtcagtggtgcactggtggcattcgca
ttctcaggaaccaagggcaaagacatcagcactatcaagtcactgagggtgttgcgagtc
ttgcgacctctgaagaccatcaaacgtctaccaaaactgaagctcttcaagggcaagttt
ttttactgcacagacgagtccaagggcctggagaaagactgcagggggctgtttttggat
tatgataaggatgatgtgacggcacaaccgagggaatggaagaaatacgagtttcactat
gacaatgtgctttgggcttttctcactctcttcactgtttctacgggagagggctggcct
acggttttgaagcactccgtggatgccacttttgaggatcagggtcccagtccaggctac
cgcattgagatgtctattttttacgtggtctactttgtggttttccctttcttcttcgtc
aacatttttgtagccttgataatcatcacattccaggaacagggtgataaggtcttgtca
gagtgcagtctggagaagaatgagagagcctgcatcgactttgctatcaatgccaaacct
ctgacacgctacatgccgcagaaccagcagtcctttcagtaccgcctgtggaagtttgtg
gtctctccgccgtttgagtactccatcatgatcatgattgctctcaacactgtggtgctc
atgatgaagttccatggggcgcctgacttttatgaggcaatgcttaagtatctcaacatt
gtcttcactgttctcttttcactggagtgtattctcaagattattgctttcggccccttg
aattacctgaaagatgcctggaatgtgtttgactttgtgactgtgctgggcagcatcact
gacattttagtcactgagattaacgagcgtcagctgaacttcagtttcctgaggctcttt
agagcagcccgactcatcaagctcctccggcagggatacaccattcgcatcctgctctgg
acatttgtccagtcttttaaggcactgccttatgtttgccttctaatcgccatgctgttt
ttcatctacgccattattgggatgcaggtgtttggaaacattgatttgaatgatgacacg
gcaatcaaccgtcacaacaacttccgcactttcctccaagctcttatgcttttgttcagg
agtgccactggcgaggcttggcatgatatcatgctgtcgtgtctgagcgagcgcacctgt
gatccgagctcaggcacccttggaaaggagtgtgggagtgactttgcctacttctacttt
gtctccttcattttcctctgctcatttctgatgttgaacctgtttgtggccgtcattatg
gacaactttgaatatctgacacgcgactcctccatcctgggccctcaccacctggatgag
tttattcgagtgtgggcggagtatgacccagccgcatgtggccgtatcaagtacctcgat
atgtatgagatgctgctccacatgtccccacctttaggtttgggaaagaaatgtcctcca
cgaatcgcctacaagcgtctggtgaaaatgaacatgcccattgcggatgacaacagtgta
cactttacctcaacgctgatggctctgatccgtactgccctggagatcaaactggcttca
ggcatggtggctcagcgtctgtcagatgctgaactgaagaaggagctctctacagtttgg
ccaaacctgtctcagaagaccatggacctgctggtcactccacataaacctaatgagctc
acagtggggaaggtgtatgcagctcttatgatctttgactattacaagcagaacagagca
aaaagacttcagatgcagcaacagcagctgaaagaacaggcaggacctggatctcagaat
aaagtcagcgctctcttagagcccattctcccactaacccacatgcaagatcagccagtg
aacggtgtcgattcagcttcagagtgtcaagctcagaccagacccagctccaccacactc
aacaatggacgcacaactcttgacaacacaataaaagggtcttcatcctgggcctcagag
aaatccaaggaagtccaaaagtctaaacggagaccaatgtctagaggtcaatctgaggat
gcctcaaatgcaaacactgcccaggagtcagtagaaatgagaaagatggagaacagtgcc
aacacagtgacctctggtggccttgagggccaaggacgtgcagcgtccatgccaaaactc
aatgctgagatgcagaggagtcattcccgtcaatctcctggaacattactggaacccatt
ccagattcccccatgaggcgctctgcatccacttttgcaccacagcgccctcacgaggtg
aatctgaatgactacattctggagaaacctgttcaggaacgccatcaccaccatcaccat
catcaccgatgccatcatcgccgggacagagacaagaaacagagatctctggacaggtcg
cctactggccatcacaaaactacaggcacagccactgactctgtagaggagagggcacat
gaccggggtcgttcccatgagaggaagcaccattcatcttcaggagagaagcagcggtat
tactcgtgtgatcgctatgccagtcgggaacactgttccagcaaatctgccgtggcaagc
tgtgccacctcacccagcgagacccaggaggccaatcttaacaagcagggcagtgggtgg
gctaaggggagcccggtgttgttgacttcaggggcgagcactccaagccgcgggcgcaga
cagctgccccagacccccctcactcctcgtccctccgtggcctacaggactgccaactct
tcccctgtgcaacttctggccacaacgaccagcttgcttcccccgagtcccggcaggctg
agccgtggtctgtccgagcacaacgctcttttactcagcggctctatctccagctcgccg
gcccccgtcagtcgcattaactcagaacccttcttggggcccccggaccaccctgctggc
ttgcagcccgaagccttcgctgtcttccaagagaatccgagccctcagatgggccgttct
cctcagactgtagggatgcccttcgtggcgatccccccacctcccccacagcagtttcgc
agggtccccaacgggtaccacttctccacgggccccagcgccagcagaggacgggcacag
cagtactacccagaggcagaggtggaggactggtgctag
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integrated database retrieval system
