Danio rerio (zebrafish): 556338
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Entry
556338 CDS
T01004
Symbol
tbc1d25
Name
(RefSeq) TBC1 domain family member 25
KO
K24799
TBC1 domain family member 25
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
556338 (tbc1d25)
Membrane trafficking [BR:
dre04131
]
Others
Specific organelles associated proteins
Auto phagosome
556338 (tbc1d25)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
556338
NCBI-ProteinID:
NP_001121708
ZFIN:
ZDB-GENE-041111-25
Ensembl:
ENSDARG00000075333
UniProt:
B0S696
LinkDB
All DBs
Position
8:23658626..23670494
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AA seq
863 aa
AA seq
DB search
MSVEEERGVVRVKVKKCEGVLPVEFRSFAVDPQITSLEVLQHILIRAFELNGKRNFGISY
LSRDRAGVEVYVSLLSDWDLDAAFVSAAKPYLQLKMDIKPSEDSPVLEDWDIISPKDVIG
SDQLQGEKRSLASAALPFTQSLLSQVGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHNY
LNSQGQLSRPEELRLRIYHGGVESSLRKVVWRYLLNVYPDGLTGQERMDYMKRKTREYDQ
LKSEWTARVSSEELEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHPQ
VSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSIKFQHLKLLLQYS
DPEFYSYLVSKGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELLG
PAFEADQSDGSHNVDMEEMEEKQTERQRRRHMLRPSREEADGERNLVMEEERGPRKEGEG
EYDVESMVRNDIPAQPPSFEKQGSFGEFKYYNGRTEDSFEVNENDSSDPTLSPVQFQSAH
STLPFSVRQSTEESEDDPGEQEPLINNLTPSSPGQRDSPNGQAASPLSTLPSGLPNWKSS
SNQSSNSASSWRTASPDALSKCTSSSSSGEKALSPDKPSGGFASSQPVLNGTGAQSPSVV
PGKSLLASPSQGYNHSLLSSPVLSFGKSPSLPKAFSSNLPSPCRPTGSGVSSPNTNKPEG
GGIKPCSLPPPQEFGKGNPFMLFLCLSILLEHRDHIIKNSLDYNELAMHFDRLVRRHNLG
RILQRAKALFADYLQSEVWDSEEGDEVSLDSPTTAATSPQTPSTRPPFLNVQPSQGAFPN
STYNLANTIPSPTTPIALSPSAS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgaggaggagaggggggtagttcgtgtcaaagtcaagaagtgcgaaggggtg
ctgccggtggagttccgctcctttgctgtagatccccaaataacctcattggaggtgttg
caacatatcctgattagagcctttgagctcaatgggaaacgcaactttgggatcagctac
ttgtctcgtgatcgtgctggtgtggaggtctacgtgtctcttctgtctgactgggattta
gatgctgcatttgtcagtgcagcaaagccttaccttcagctcaagatggacatcaaacca
tcagaggacagtcctgttttggaggattgggacataatcagccctaaggatgtgattgga
tcagaccagttacagggagagaagaggtcactggcgtccgctgcacttcctttcacacag
tcgctgctttcccaggtgggtcgtactctgtcgcgtgtgcagcaggccttgagttggtcc
tatggagaggaagtgaaaccattcaagcctcccttaagtgatgctgaatttcacaattac
ctgaacagccaaggtcagctgagtcgaccagaagaactcagacttcgtatttatcatggt
ggagttgagtcatccttacgcaaggttgtttggcggtaccttctcaatgtgtacccagat
ggtctcacagggcaggagagaatggattacatgaagcggaaaacgagagagtacgaccag
ctgaagagtgaatggacagcacgagtcagttcagaggaattggagtttattcggggaaat
gttctgaaagatgttcttcgaacagatcgagcacatccctactacgcgggctcagaggac
agcccacatctaaccgccttgacagaccttctcaccacttttgctattacacacccacag
gtgtcttattgtcaaggcatgagcgacattgcctcgccaatccttgccgtcatggacaat
gaagctcatgcctttatctgcttctgtggcattatgaaacgacttgaaggcaacttccgc
cctgacggacaacttatgtccattaagttccaacatctcaagctgcttctgcagtattca
gacccagagttttattcctacctagtctcgaaaggtgctgatgatctgtttttctgttac
cgctggcttcttttggagcttaagcgtgaatttgcttttgatgatgcccttcgaatgctg
gaggtcacctggagctccttgccacccgatccccctgagacagaggtagagcttctaggg
ccagcgtttgaggcagatcagtctgatggctcacacaatgtggacatggaggagatggaa
gagaagcagaccgaaaggcagaggagacgtcatatgctaaggccatctcgagaagaggca
gatggtgaacgtaacctggtcatggaggaggagagaggtcctcggaaggaaggcgaagga
gagtatgatgttgaaagcatggtcaggaatgacatccctgctcagcctccttcatttgag
aagcaggggagttttggagaattcaaatactataatggccgtactgaggacagctttgag
gtgaatgaaaatgactcatctgatcccacattatctccagtgcagtttcagtcagcacac
tccacgctgccattctcggtccgccagtcaacagaggagagtgaggacgacccaggagag
caggaacctcttatcaataatcttacaccatcatctcctggacagagagactcacctaat
ggtcaggcagcttccccactgtcaactcttccttccggtctaccaaactggaaaagtagc
tccaatcagtcatctaattctgcatccagttggagaacagcatctcctgatgccttgtca
aaatgcacatcctcttcttctagtggagaaaaagccttgtctcctgataaaccttctggg
gggtttgcatcctcgcaacctgtattaaatggaactggggctcagtccccatcagtggtt
ccagggaaatcattactggcatctccatcacaaggttacaatcattctcttctctcatca
cctgttttatccttcggtaagtccccgtctttgcccaaggcattctccagtaatctcccc
tcaccctgcagacctactgggtctggcgtaagttctccaaacacaaacaagccagaagga
ggtggaattaagccctgctcgctcccccctccccaagaatttgggaaagggaatccattt
atgcttttcctttgcctctctatccttctagaacaccgtgaccacattattaaaaacagc
ctggattacaatgagctggccatgcactttgaccgactggtccgtcgccacaaccttggg
cgcattctgcagcgagccaaagccctctttgcagactaccttcagagtgaggtatgggac
tcggaggaaggggacgaagtcagcttggactccccaaccacagcagcgacatccccccaa
actcccagcactaggccccctttcctcaatgtacagccctctcagggtgccttcccaaac
tcaacttataatctggcaaataccattccctctccaacaactcccattgccctctcgccc
tctgcttcctga
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