Danio rerio (zebrafish): 556456
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Entry
556456 CDS
T01004
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03030
DNA replication
dre03410
Base excision repair
dre03420
Nucleotide excision repair
dre03430
Mismatch repair
dre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
556456 (pold1)
03410 Base excision repair
556456 (pold1)
03420 Nucleotide excision repair
556456 (pold1)
03430 Mismatch repair
556456 (pold1)
03440 Homologous recombination
556456 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
556456 (pold1)
03400 DNA repair and recombination proteins [BR:
dre03400
]
556456 (pold1)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
556456 (pold1)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
556456 (pold1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
556456 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
556456 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
556456
NCBI-ProteinID:
NP_001034899
ZFIN:
ZDB-GENE-060429-1
Ensembl:
ENSDARG00000027689
UniProt:
Q2KNE0
LinkDB
All DBs
Position
3:complement(16687830..16719244)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPAMGGASQAKKGKPSTEWEDSPSQFEEELALFDEMDMEVESGEGQAGHDVI
PVGDLFSTDLNPRWKRPHASPLHPKSDTLIFQQIDLDYYLGAAVAGMPGQVQGKVPIVRM
FGVTDNGNSVCCHIHGFAPYFYVPAPNGFTNAHLAGFQRELNSVVLKDMRSNKDNIAVTV
LAVDITKKESMYNYHGNKPHDFLRITMAMPRLVAPAKRLLEQGFKFANFATQSYQAFEAN
IDFEIRFMVDSNVVGCCWIELPKGKYQLREERREGQTDSKYPGKVSLCQYEVDVAWDSLI
SHPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEPFIRTVFT
LQSCASIVGSQILCFTQEKLMLQSWAEFMRTVDPDIITGYNIQNFDLPYLLNRAATLKVN
MFPYLGRVWGCKSVLKDSSFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKSQIEKLGLGPDDFIKTPTGDLFVKSSVRKGLL
PEILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESRYTLDNGYQADAKVIYGDTDSVMVKLGVATVQEAMNQGK
EAAEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSAEHHDKMDCKGIETVRRDN
CPLVANLINTCLQNILIDRDPDGAVTHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCR
AVLKTDVAVCDFCKKRESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaaggcgcaatgggggccctgcaatgggcggggcttcacaggccaaaaaa
ggcaagcctagcacagagtgggaggatagcccctcccagtttgaagaggaacttgcatta
tttgatgaaatggacatggaggtagagtcaggggaggggcaagctggtcatgacgtcatc
ccagtaggtgatttattctccactgatctgaatccacgctggaaaaggcctcatgcgtcg
cctcttcatccaaaatcagacacgctcatcttccagcagatagacctggattactacttg
ggagcggcggtagcaggaatgcctgggcaggttcagggcaaagtccccatagtgcgcatg
tttggtgtgaccgacaatgggaatagtgtgtgttgccatattcatggattcgccccatat
ttctatgttcctgcccctaacgggtttacgaatgcacacttggctgggtttcagagagag
ctgaattctgtggtgttgaaggacatgcgctccaataaagacaacatagcagtcactgtg
ctggcagtggacatcaccaagaaagaaagtatgtataattaccatggaaacaaacctcat
gacttcctgcgcatcaccatggccatgccacgtctggtcgccccagcgaagcgtctcctg
gagcagggttttaaatttgccaactttgccactcagagctaccaggcctttgaagcaaac
atcgacttcgagatcaggttcatggtagacagcaatgtggttggttgctgctggattgag
cttcctaaagggaaataccagctgagggaggagaggagggaaggacagactgactctaaa
tatccgggaaaggtgtccttgtgtcagtatgaggtggacgtggcgtgggacagtctgatc
agtcatcccgctgaaggagaatggcagagaatcgctccactcagagtcctcagctttgat
atcgagtgtgctggcagaaaaggtgtgtttccggagccggaggtcgaccctgtgattcag
atcgcctctatggtgcagcgtcagggagagaaggaaccgtttattcggacagtcttcacc
ttgcagagctgtgccagtatagtgggctctcagattctctgcttcacccaggagaaacta
atgctgcagagttgggctgagttcatgaggaccgtggatcctgacatcatcactggctac
aatatccaaaactttgaccttccatatctcctcaacagagctgcaaccttaaaggtgaat
atgttcccgtatctgggccgtgtgtggggctgtaaatcagttctgaaggactccagcttc
cagagcaagcagatgggccgcagagagaacaaaaccatcaatatggagggacgcgtgcag
tttgacctgctgcaggtgctgctcagggattacaaactgcgctcttacacactaaacgcc
gtcagtttccattttctgcaggagcagaaggaggatgtgcagcattcgatcatcacagac
ctacagaatgggaatgagcagacacgcaggcgtttggccgtatactgtctgaaggatgcg
tatctgcccctgcgtttgctgcagaagttgatgtgtgtcattaactacatggaaatggcc
agagtcaccggagttcccctgacgtacctgctttctcgcggacagcagattaaagtggtt
tcacagctcctcagacaggctatgaagcaggatcttgtgatgccggtggtgaagactgag
ggaggggaggactacaccggagccactgtcattgaaccagagaaagggtattacagtgtt
cctatagcaactctggatttctcctctctgtatccctccatcatgatggctcataactta
tgttacactacactcctgcagaagagccagattgaaaaactgggtttgggtccagatgat
tttatcaagacccccaccggtgatttgtttgtaaagagctcagtgagaaaaggtcttctc
cctgagatcctggaaaacctgctgagcgccaggaaaagggcaaaggcagagctgaagaaa
gagacggacccctttaaaaagcaggtgctggacggaaggcagttggctttgaagatcagc
gcaaactcagtgtacggcttcaccggggctcaggtcggcaaactgccctgtctggagatc
tcacagagcgtcacaggctttggtcggcagatgattgaacagaccaaacagctcgtggaa
tcaagatacacactagataatggctaccaggccgatgcaaaggtcatctatggagacaca
gactctgtgatggtgaaactgggtgttgcaactgtgcaggaagcaatgaatcagggaaag
gaggctgctgaatgggtctcctcccacttcgttccaccaattaaattagaatttgagaag
gtgtattacccgtatctgttaattaataaaaagcggtacgccgggctgtatttctcctcc
agtgctgaacatcatgataagatggactgcaaaggaatagagaccgtgaggcgagacaac
tgccctctagtggccaacctcatcaacacatgcctccaaaacatcctcattgacagagac
cccgacggagcagtaactcatgctaaagaggtgatctcagaccttctgtgcaaccgcatt
gacatcagtcagctggtcattactaaggagctcacgcgcacagcacaggagtatgcagga
aaacaggcccacgtcgaactagctgagaggatgcgtaagcgggacgccggtagtgctcca
aatctcggagatcgagtgccgtacgtcatcatcaaagcagcaaagggagttgcggcgtat
atgaaatcagaggaccccatctatgtgctggagaacaacatccctatagacacgcagtac
tacctggagcagcagctctccaaaccattactgcgcatcttcgagcccattctgggggag
agcaaagctgagagcgtgttactgaagggagatcacacccgctgtaagacggtcttgacc
tcccgagtcggtggtctcatggctttcgctcagaaacgaagcacttgcatcggctgcaga
gctgtgctcaaaactgatgtggctgtatgcgacttctgcaaaaagagagaatctgagctc
tatcaaaaggagattgctcatctgtcgacactagaggagaaattctctcgcctgtggact
cagtgtcagcgctgtcagggttcacttcatgaagacgtgctttgcaccagtcgagattgc
cccatcttctacatgaggaagaaggtgcagaaagatttagacgatcaggagaagctcgtc
tcccgtttcggctggtga
DBGET
integrated database retrieval system
