Danio rerio (zebrafish): 556605
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Entry
556605 CDS
T01004
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b precursor
KO
K05636
laminin, beta 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
556605 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
556605 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
556605
NCBI-ProteinID:
NP_001264059
ZFIN:
ZDB-GENE-041210-197
Ensembl:
ENSDARG00000045524
UniProt:
F1REL9
LinkDB
All DBs
Position
4:26358458..26405242
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AA seq
1767 aa
AA seq
DB search
MRLFHTTALVISIALHTLAQLPDHNDMCAEGSCYPATGDLLIGRAHRLTASSTCGLNSPE
EFCMVNILEDTVCFECDSRRLYNEFTHPDSHTIENVVTTFAPNRLKTWWQSENGVENVTI
QLDLEAEFHFTHLIMTFRTFRPAAMLIERSADYGRTWQVYRYYAFNCDESYPHVPKGPIK
KVDDVICDSRYSGMEPSTEGEVIFRVLDPAFKIPDPYSPHIQNLLKITNLRIAMEKLHKL
GDLSNYRKEARKKYFYAVYDMVIRGNCFCYGHASKCAPIGNEAGVEGMVHGHCMCNHHTT
GLNCEECEDFYQDQPWRPAVGRETNACKKCECNRHSDSCHFDMAVYLSSGNRSGGVCDDC
EHNTQGQWCENCKPFYYKHPQRDIRDPRICEPCDCDPRGSLYEGLCDSATNVMRDMIAGQ
CHCKANVEGQRCDHCKKGHYGLSDDPLGCRSCSCNPLGTLPGGTPCDIQTGSCYCKRLVT
GRNCDQCLPQHWGLSNDMDGCRPCDCDVGGALNNNCSQETGQCACKEHMFGRRCDQLQSG
YYFAALDHYIYEAEFASFGPAVKVVQRPLPQDRKPTWTGTGFVNVPEGETLTFNINNFPR
SMEYNLMIRYEPLLPDEWEQVIVKLERPRDIDQSTHCTTTYDDEQMVSLHPGSRYVVVPN
PVCLETGQNYTLKISFPQYSSYNYHSSPRTLVDSLVLLPEVQDLDLFCGGDHQQKNWEMF
QKYRCLERSQSVIKIPLTDICKDYIFSVSALLHNGALECKCDPRGSLSTVCDPIGGQCQC
RPNVSGKNCDACAPATYLFGPSGCRACDCNPLGSQNLFCHPSNGQCLCVPGAFGRQCGNC
KPNHWGYPTCKPCSCNGNSEQCHPLTGKCLNCRGHTSGHNCERCESGYHRSTLLGSRDQC
RPCMCPNGPGSGMQFSESCYQNPNTLQMVCVCNAGYKGPKCEECASGYYGNTRVPGGRCH
PCQCNGNINMQDPESCDARTGACLKCLFHTDGTECQYCSRGYYGDARSQNCRRCMCNLVG
SSRQSCVDGLCECDRISGQCPCLPGVEGQLCDRCAPNTWNINSGRGCQPCRCHPEHSYSS
SCDLLSGQCSCKPGFGGKTCEECRELFWGDPEVECHACDCDPRGIATQQCNKTSGDCVCI
EGVAGRRCDTCGRGFVGTFPDCEACHYCFREWDVNVGELTNHTQRLVDTVEEMKDSGVAT
PYKDIIKSLDDESRQLREILEDDKVQQTFAHTQRMMKKASETASLLRKSMDRSETDLDMV
STDHHRAIKDLKSLTKEAQNLQEITSDKQQQVLNIKHSDPRGAVDSIRDYYRESAEADFR
VSQAISEPVRQSALLRKDTEAKLERTENEFNLKHQLYTQRLSKIETELNSTDLSRLSRQV
CGGAAGLDGCKDCGGLGCKHEDGMSHCGGEGCDTIVTRSQDSLNKAKNLDQEVLHTLKEV
DKLNRMVSDARGRADEAKLSAQDVLLRANQSKARVEQTNEDLRNLIQQIRDFLTNETDPK
RIEEVANEVMKLSLPVSSGALKNMTTEIRKHVARLTNVEDILSQTAEKTRNAERLLEQAK
AANKKATTLKHTSDEVKKTLEDTDRAQTAANEKIKAAERDLNQTNQQITSVQSKTEATEF
KLSSSTGRMVNLEGDLDDLQRKTAETSRSADQTQRQAEDTTAELEHTERDLDTLVLPKYQ
LASGLIDQKAAGVFDARQKAEQLQQEAKDLLIDATNKLQRLRELERSFAANQHILMGKSQ
ELEGLENEARDVLQELSQKINIYSTCA
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttccacactacagctcttgtcatatctattgctctgcacactttggcacaa
ctgcccgatcacaatgacatgtgtgcggagggcagctgttaccctgcgaccggtgatctg
ctgataggaagagcacatcgactcacagcctcctccacctgtggactgaatagtccagag
gaattctgcatggtcaacatattagaggataccgtgtgctttgaatgtgattcccgacgg
ctgtacaatgaattcacccatcccgacagccacaccattgagaacgtggtgacaaccttc
gctcccaaccgccttaaaacctggtggcagtctgaaaatggagttgaaaatgtgaccatt
cagctggatttggaggctgaattccacttcacacacctcatcatgacctttaggacattt
cgtcctgcagccatgctgattgagcgatcagcagattatgggaggacctggcaggtgtac
cgctactacgctttcaactgcgatgaatcctatccacatgtcccaaaaggaccgatcaaa
aaagtagatgatgtcatttgtgatagccgctattccggcatggaaccatcaacagaagga
gaagtcatttttagggtacttgatcctgcatttaagattcctgacccttatagtcctcat
attcagaacctactgaagatcacaaacctgcgcatagcaatggaaaagttgcacaaactt
ggtgatctgtctaattaccgaaaagaagcgagaaagaaatatttctatgctgtctatgac
atggtcatacgtggcaactgtttctgctatggccatgcctcaaaatgtgctcctattggc
aacgaggcaggcgttgaaggaatggttcatggtcactgcatgtgtaatcaccacactact
ggactgaactgtgaagagtgtgaggacttttaccaagatcagccctggagaccagcagta
ggccgagagacaaacgcttgcaagaaatgtgagtgtaaccgtcactcagactcctgtcac
tttgacatggccgtttatctgtcatcgggaaaccgcagtggaggagtttgtgatgactgt
gagcacaacacacagggccaatggtgtgagaactgcaaacctttctactacaagcaccct
caaagagatatcagagaccccaggatctgtgagccttgtgactgtgatccgcgaggttct
ctatatgaaggcctgtgtgacagcgctacaaatgttatgagagacatgattgcgggacag
tgtcactgcaaagctaacgtggagggacaacgttgtgaccactgtaaaaagggacactat
ggcctcagcgatgacccgttaggctgtcggtcatgcagctgtaatcctctaggcacactc
ccaggaggaactccttgtgatatacagacaggaagctgttactgcaaacgtcttgtgact
ggacgtaattgtgaccagtgtctgcctcagcactggggtctcagcaatgatatggacggc
tgcagaccatgtgactgtgatgtgggcggggctttgaacaataactgctctcaagagaca
ggacagtgcgcttgtaaggagcacatgtttggtaggcgttgtgaccagttgcaatctggg
tactacttcgcagccctagaccactacatttatgaagctgaatttgcttccttcggaccg
gcagtaaaagtggttcaaagaccgttacctcaggatcgtaaacctacatggacaggtaca
ggctttgtgaatgtaccagagggtgaaacgctgacattcaacattaacaatttcccaaga
tctatggaatacaacttaatgatccgctatgaaccactgttgccagatgaatgggagcag
gttatagtaaagttggagcggcccagagacattgatcagtcaacacactgcactactaca
tacgatgatgaacagatggtctcactgcaccctggatcaagatatgttgttgtgcctaat
ccagtgtgtctggaaacgggtcaaaactacaccctcaaaattagtttcccacagtactct
tcatacaactatcactcctctcctcgcacacttgttgattcactagtgcttctgccagag
gtgcaagacctggatctgttttgtggaggagaccatcagcagaagaactgggagatgttc
cagaaatacagatgtttggagcggagccagagtgttattaaaatccctttaacggatatt
tgcaaagactatatcttcagtgtgtcagctctgctgcacaacggagcccttgagtgtaag
tgtgacccacgagggtctctgagcaccgtgtgtgatcctatcggtgggcagtgtcagtgt
cgacccaatgtttcaggaaagaactgtgatgcctgtgctccagccacctacctgttcgga
ccctcaggatgtagagcttgtgactgtaatccgctgggctctcagaaccttttctgccac
cccagcaatggacagtgtttgtgtgtgcctggagcatttgggcgccaatgtggcaactgt
aaacccaaccattggggctaccctacttgcaagccctgctcctgtaatggaaacagtgaa
cagtgtcaccctctcacaggcaaatgtctgaactgcaggggtcacacctcaggccacaac
tgcgagaggtgtgaaagtggttatcaccgtagcacattgttgggctccagagatcaatgc
aggccttgtatgtgtcctaatggacccggaagtggtatgcagttttctgagagctgttac
caaaatcccaacactcttcaaatggtctgtgtctgcaacgcaggctacaagggacctaaa
tgtgaggaatgtgcttctggttactatggcaacactcgggtaccagggggacggtgccac
ccatgtcaatgtaatggaaatattaatatgcaggaccctgaatcatgtgacgcacgcact
ggtgcttgtctcaaatgcctgtttcacactgatggcactgagtgccagtactgtagtcgt
ggctactatggagatgcccgttcacagaactgtaggagatgcatgtgcaatctcgtaggt
agttccagacaaagctgtgttgatggcctgtgtgagtgtgaccggataagtgggcagtgc
ccatgtctgcctggcgtggagggtcagctctgtgaccgctgtgcccccaacacatggaac
atcaacagtggaagaggatgccagccttgccggtgccaccctgaacactcctacagttcc
tcctgtgacttgctgtcaggtcagtgttcctgtaagcctggttttggaggcaagacatgc
gaggagtgcagggaactgttttggggtgaccctgaagttgaatgccatgcatgtgactgt
gacccaagaggcatcgccactcagcagtgtaataaaacatcaggtgactgcgtttgcata
gagggtgttgccggccgcaggtgtgacacgtgtgggcggggctttgtaggcacctttcca
gattgtgaggcgtgtcattactgtttccgtgaatgggatgttaatgtgggagagctgacc
aatcacacgcagaggctggtggatacggttgaggaaatgaaggattcgggggtggcgaca
ccatataaagacatcataaagagtctggacgatgaaagtaggcaactccgagagatactg
gaggatgacaaggttcagcaaactttcgcacacacgcagaggatgatgaagaaagctagt
gagacagcatcacttctgagaaagtctatggaccgatctgaaacagacttggacatggta
tctactgatcatcaccgggcaattaaggacctaaaaagtctgaccaaggaggcccaaaac
ctacaagaaatcacctctgataaacagcagcaggttttgaacataaagcattcagacccc
agaggtgcagtggacagcatccgtgactattatagggaatcagctgaagcagatttccgt
gtcagtcaagccatctctgaaccagtcagacagtctgccttgctacgaaaagatacagag
gccaaactagaaagaactgagaatgaatttaacctgaaacatcagctgtacacacagagg
ctgagcaaaattgaaactgaactgaactcgacagacctttcacgactaagccgtcaggtg
tgtggaggggctgcaggtctagatggatgtaaggattgtggtggtctgggctgtaagcat
gaggatggcatgtcccattgtggtggggaaggatgtgatactattgtgacccgatcccaa
gactccttaaataaagccaaaaacttagaccaggaggtcctgcacactctcaaagaagta
gacaagttaaacaggatggtgtcagacgctcgaggacgtgcggatgaggctaaacttagc
gctcaggatgtgttactaagagccaatcagagcaaagcacgagtggaacagaccaatgag
gatctcagaaacctcattcagcagatacgagacttcctcacaaacgaaaccgatccaaag
cgtatagaggaagtggctaatgaggtgatgaaactgagtctacctgtgtcgtccggggca
ctaaaaaacatgaccacagaaatacgcaaacatgtggccagattgaccaatgtggaggat
attctttcccagacggcagaaaaaacccgcaatgcagagagactcctggaacaagcaaag
gctgccaataagaaagcaacaactctaaaacacacctctgatgaggtgaagaaaactcta
gaggacaccgaccgtgctcaaactgctgccaatgaaaaaattaaggcagctgagcgtgac
ctaaaccaaacaaatcaacaaatcacttctgtacaatcaaaaactgaagcgaccgaattc
aaactgagcagcagcacaggcagaatggtaaatctagagggagatcttgatgatctccag
aggaaaactgcagaaacgtcccgcagtgcagatcagactcagagacaagctgaggacacc
acagcggagctggagcacacagaacgggatttggatacactcgtgctacccaagtatcag
ctggccagtggcctgatagatcaaaaagcagcaggtgtgtttgatgcacgtcaaaaggcc
gagcaactacaacaggaggcaaaggatctattaatagatgccaccaacaagctacagaga
ctaagagagctggagagatcatttgctgcaaatcagcacattctaatggggaaatctcaa
gagctagaagggctggagaatgaagccagagatgtgctgcaagagctcagtcagaagatc
aacatctacagcacctgcgcttaa
DBGET
integrated database retrieval system
