Danio rerio (zebrafish): 556743
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Entry
556743 CDS
T01004
Symbol
sema6cb
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C isoform X5
KO
K06842
semaphorin 6
Organism
dre
Danio rerio (zebrafish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
556743
NCBI-ProteinID:
XP_009290612
ZFIN:
ZDB-GENE-040724-119
Ensembl:
ENSDARG00000000189
UniProt:
A0A8M3B1N9
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All DBs
Position
16:33151376..33425628
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AA seq
1039 aa
AA seq
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MRLVILGSRPLLALTLMLTLTCLKHLCHGATPFPQDLEPIRTVGSEHTYLYPSFQGNMSD
NDTARLGLDFQRMLRINHMVYIAARDHVFAINLSASLERIVPQQKLTWKTKDVEKCTVRG
KNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSSLEQDGEEVIGQARCPFESRQ
SNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGN
YVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSF
FYFDVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKVFNGKFKEQRNSE
SAWTPVPDEAVPKPRPGSCAGDGPAAGYKSSTNFPDETLTFIKSYPLMDEAVPSVNNRPC
FTRTTSRFKLTQIAVDTAAGPYKNYTVVFLGSENGHVLKVLASMHPNSSYSTQVLEDIDV
YNPNKCNVRGEDRRILGLELDKDHHALFVAFTGCVIRVPLSRCSDYGICRKSCLSSRDPY
CIWLSAGNCATVAPGFKSGFEQYVESGYPQYPDSCHDVLATTRKQNPAVDSAYGKTSPTS
ASTTNQGPAGAPETGVRRPPEVDKSNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHN
VNKTKRLSKDPEAPIPHALSLRSLAKLNGLLESQNKDEKLEVSSPKLYNSFFANGKEQAH
RRNAHHAAMTELIHPHHHHSAELSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPK
SHNMGASRPTSAMQHQMFPFSHGLTNGQVLGGSVHMDERKVHNTERVVSQPYHCYPHKIV
DVTSLDELLKHIHEINVATGKSPSVLTSSMSANAGQMAFANRVQPHIPETESAPYYSSST
LPRDSLTRRMDIPPEIPPHHQSTLERVSRHPAQRHSLITTPKMPSGGVVPRQHSFNQRSS
HQPLLLSRMNSNGSNSGCDVRHPLIPNGYLTRQHSYSEQPEVHRGAIVRRTASLKPDVPP
KPLFIPASSPVNQAGKFNY
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggtgattttggggtcgcggccccttttggccttgaccctcatgctcaccctc
acctgcctaaagcatctgtgccatggtgcaacaccctttcctcaggatctggaacccatc
aggaccgttggtagtgaacacacctacctgtaccccagtttccaggggaacatgtcagat
aacgacaccgccagactgggcctggattttcagaggatgctgcggattaaccacatggtc
tacatcgctgcaagagatcacgtttttgccattaacctcagtgcttcattggagcgcatc
gtcccccaacagaaactgacatggaagacaaaagatgtggagaaatgcacagtcaggggg
aaaaacagcgatgagtgttacaactacatcaaagtgctggtgccacgtaacgatgaaacc
ctctttgcgtgcggaaccaatgcgttcaaccccacctgtcgcaactacaagatgtcatct
ctagagcaggacggagaagaggtgatcggtcaagcccgctgccctttcgagtcccgccag
tccaacgttggcctgtttgccggcggtgacttctactcagccacgatgactgattttcta
gcgagcgatgcagtgatttaccgaagtttaggagaaagcagtcctgtcctgcgtactgta
aaatatgactccaagtggctgcgagaaccgcattttcttcatgccatcgagtatgggaac
tacgtgtacttcttcctcagtgagattgcagtggagtataccacccttggcaaggtggtg
ttttcccgagtggctcgcgtgtgtaagaatgataacggcggttctccacgggttctagaa
agatactggacgtctttcctgaaggcccggttaaactgctcagttcctggtgactctttt
ttctactttgatgttcttcagtcattaacaaacgtcatgcagatcaaccacaggcctgca
gtgttgggcgtctttaccactcaagccaacagcatcactggttctgctgtatgtgcattt
tacatggatgacatagagaaagtgttcaatgggaagtttaaggagcagcgaaacagcgag
tccgcctggacaccagttcctgatgaagcggtgcccaaaccccggccagggtcgtgtgct
ggtgatggccctgctgctggttacaagtcctccacaaatttccctgatgagactcttacc
ttcattaagtcttatccactaatggacgaggctgtgccgtctgtcaacaaccgaccctgc
ttcacacgaaccaccagcaggttcaagctgacccagattgcagtggacacggcagctggc
ccatataagaactacactgtcgtgtttctggggtcagaaaatggacatgtcctgaaggtt
ttagctagcatgcatccaaactcctcgtacagcactcaggttttggaggacatcgatgtt
tacaaccctaacaaatgtaatgtgcgtggggaggaccggaggattctgggattggagctg
gataaagaccatcatgccctgtttgtggcctttacaggttgcgtaatccgtgttccactc
agtcgctgttcggattatggaatctgcagaaagagctgcctgtcctcacgagacccctat
tgcatctggctgagcgcagggaactgtgccacggtggcgccgggattcaagtctggattc
gagcagtatgtagagagtggatatcctcagtatccagacagctgtcacgatgtcttggca
acgactcgaaagcagaaccctgcagtggactctgcatacggaaagacctcacccacaagt
gccagcacaaccaatcaggggccagctggtgcccctgagacaggagtgcgccgaccccct
gaggttgataagtccaaccacagtgttcactacaccctgctcatagcgtgtgtcctggtg
gcgttcgtcctgggagctttcctctccggattccttgtttcctgttactgcaaccacaac
gttaacaagacgaaaaggctgtcgaaagatccagaagcgccgatcccacatgctctctcc
ctgcgcagcttggccaagctcaatggcttgctggagagccaaaacaaggacgagaaacta
gaggtgtcctcacccaaactctacaactcattctttgccaatgggaaagagcaagcacat
cgcaggaatgcccaccatgctgccatgacagagctcattcacccacatcatcaccactct
gctgagctctccggccttcccacaccagattcgacaccagagctcccaatcaagagcatg
aaggcctttaagaaccagtgggagaagaaccaaaactgcaataacgctaaagaacccaag
tcccacaatatgggagcatcacggccaacaagtgcaatgcagcatcagatgttccctttc
tctcatgggctgactaatggacaggtactaggtggctccgtacacatggacgaacggaaa
gtccacaacacggagcgtgtggtaagccaaccgtatcactgctacccgcacaagattgtg
gacgtcacctcacttgacgagcttttaaaacatattcatgaaatcaacgtggccacaggc
aagagtcccagcgtcctcacctcgtccatgtcagccaacgccggtcagatggcgttcgcc
aatcgcgtacagccacacatcccagaaacagagtccgcaccatactacagttcctctaca
cttcctcgggacagtctcactcgtcgcatggacatcccaccagaaattcctccccatcat
cagtccaccctagagagagtgtcccgtcacccagctcaacgccactctctgataaccacc
cccaagatgcccagtgggggtgtagtacctcggcagcacagcttcaaccaacgaagctcc
catcagccactcttgctctcccgaatgaactctaatggcagcaattcgggttgcgacgta
cggcacccactcatcccgaacggatacttaactcgccagcatagctacagcgagcagcca
gaagtccaccgtggagctattgttcgtcggacagcctcgctcaagcctgacgtcccaccc
aaacctctgttcatccctgccagctcacctgtcaaccaggcagggaagttcaactactga
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