Danio rerio (zebrafish): 556823
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Entry
556823 CDS
T01004
Symbol
cylD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X2
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04217
Necroptosis
dre04622
RIG-I-like receptor signaling pathway
dre04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
556823 (cylD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
556823 (cylD)
04625 C-type lectin receptor signaling pathway
556823 (cylD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
556823 (cylD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
556823 (cylD)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
556823 (cylD)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C67
556823 (cylD)
Ubiquitin system [BR:
dre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
556823 (cylD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CYLD_phos_site
UCH
Motif
Other DBs
NCBI-GeneID:
556823
NCBI-ProteinID:
XP_005169076
ZFIN:
ZDB-GENE-061108-2
Ensembl:
ENSDARG00000060058
UniProt:
F8W5E2
LinkDB
All DBs
Position
7:complement(37724342..37763203)
Genome browser
AA seq
912 aa
AA seq
DB search
MSSTLWSQEKPGGSFRDDWRFYIVVKECTVERPGQKTLRIPRGSLGQACQERNSLGRTIP
ASKGKRSLRILDQTNVVVSVDERDVMELEEKLAELLFPITNCEERYSLLCNRSRLDRARD
INCGSKVRVQLRSGDEPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDEELEVDRVTLEDNDPEEEGEAPPLEINSRVLVQTREG
PERGTVIFCDLLPGNESLGYYVGVDMDNPIGDWDGIIDGKQLCNFASLEHTRLVPICDVM
PEYSMQDQRLPKVFACRGGNDKPVSQSKPKSKVGEDPAKSLTDMPPDFNPSSSPSRAPPT
TTSLSNDNKFHSLPFSLSRKVGPNGSMSHGPLSLSAGSVMGEQPELLPAATPLQRASSPP
QGQPGLEVGSMVEVKENPPLCGVIRWVGLPPGLQESLAGLELEEECVGCTDGTFKGIRYF
TCPPKKALFVKLKCCRPDSRFPSLHHSPNPIERCNSIAFGGYLSEVVNENTPPRTENDGL
EVMVGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEI
VNPLRIHGYVCATKIMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLRLRS
AGQKVQDCYFYQIFMDKKDKVMVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFK
MFNKIFPSLELDITDLLDDTPRECRICGGLALYECRECYEDYDITPGKIKQFCEKCNTQV
HLHPRRKTHRYVKLSVPKELHESVWRQGSYPHQQMELFAVLCIETSHYVAFVKYGSADSA
WLFFDSMADRDGGQNGFNIPQVSRCPEVGEYLKMTPEELHALDPKNIQGYARRLLCDAYM
CMYQSPTMSLYK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgagctctacgctatggagccaggagaagccagggggcagtttccgggacgattggcgt
ttctacattgtggtgaaggaatgcacggtggaaaggccaggccagaagactctgcgcatc
ccacggggcagcctaggtcaggcctgccaggagcgcaacagcctcggacgcacaatccca
gccagcaaaggtaaacgtagcctacgcatcctggaccagaccaatgtagtggtgagcgtg
gatgaacgggatgtgatggagctcgaggagaagctggcggagctactgttccctatcacc
aactgtgaagagcgttacagcctgctgtgtaacaggtcgcgtctggacagggcccgcgac
atcaactgtgggtcaaaagttcgagtgcagcttaggtcaggcgatgaacctctcccaggc
gttgtccgctttaaaggagctttgctgcctgatcgagcactgagtgggatctggtttggt
gtcgaactgctggaggagggtcggggtcaaggtttcacggagggctcttatcagggtcag
cagctgtttcgttgtgaagatgaatgtggggtctttgttgcactggataaacttgagctc
tgggaagatgaggagttggaagtggatcgtgtgacgctggaggataatgacccggaagag
gaaggtgaagcaccgccactggagatcaactcacgagtcttggtacagactcgggaagga
ccagaaaggggcactgtaattttctgtgacctactgcctggcaatgaaagtctgggatac
tacgttggcgttgatatggacaatcccattggagactgggatgggatcatcgacggcaaa
cagctctgtaattttgctagtctcgaacacacccgtctcgtccccatctgtgatgtgatg
ccagaatactccatgcaggatcagaggctgcccaaagtctttgcctgcaggggtggcaat
gacaaacctgtcagccagagcaaaccaaagagcaaagtcggcgaagacccagccaaatcc
ctgaccgacatgccgccagacttcaacccaagctcatctccatctcgagctccgcctacc
accacctcgctgtccaatgacaacaagttccactcgctgccgttcagcttgagccgaaaa
gttggccccaatggcagcatgagccatgggcccctttccctatccgccggctcagtgatg
ggggagcagccggagctcctgcctgctgctacacctctgcagagggcttcatcaccacca
caaggccagccaggtttagaggtcgggtcaatggtggaggtcaaagagaacccaccgctg
tgtggggtcatccggtgggttggtctccctccaggactacaagagtcactagctggacta
gagctggaggaggagtgtgtgggctgcactgatggtacatttaaagggattcgttatttc
acgtgtccaccaaagaaagctctgtttgtcaaactgaagtgctgcaggcctgactcacgg
tttccttccttacatcattcacctaaccccatagagcgatgcaactctatagcttttggg
ggttacctgagtgaagtggtgaatgaaaacactcctccgcggacagagaatgatggtttg
gaggtgatggtggggaagaagaaaggaattcaaggacattataactcctgctatctggac
tctacattgttctgtcttttctcctttagttctgtgttggatacggttctcctgaggccc
agatccaagactgatgtagaatattacaaagagacccaagagttattgcgcacagaaata
gtcaatccactacgaatacatggttacgtgtgtgccaccaaaatcatgaaacttcggagg
atactggagaaagtggaggcggcgtctggattcacttcagaggaaaaggatccagaggag
ttcctcaacatcctgtttcatcacatcctgagagttgatcctcttctcagacttcggtct
gcagggcagaaggttcaggactgttacttctatcaaatctttatggataagaaagataaa
gtgatggtgccgaccagccagcagcttctggagtggtcttttatcaacagtgatctcaaa
tttgcagaggccccttcttgccttatcattcagatgcctcggtttgggaaggacttcaaa
atgtttaataagatcttcccatctctggagcttgacatcacagatctattagacgacacc
cctagagaatgtcgaatctgtggaggtttagctctatatgagtgcagagagtgctatgaa
gattatgacatcacaccaggaaagatcaagcagttctgtgaaaagtgcaatacgcaggta
catctgcacccacggcgtaagactcatcggtatgtgaagttatcagtccctaaagagctg
cacgagtcagtatggaggcagggttcttaccctcaccagcagatggagctgttcgctgtg
ctttgcattgagaccagccactatgtcgcctttgtcaaatacggatccgcagactcggcc
tggctgttctttgatagcatggctgaccgcgacggtggtcagaatggatttaacatccca
caggtgtcgcggtgtccagaagtcggggaatacctgaaaatgactcctgaagaactccac
gcgctggacccaaaaaacatccagggctatgcacgcagacttctctgtgacgcttacatg
tgcatgtaccagagtcccaccatgagcctctataagtag
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