Danio rerio (zebrafish): 556864
Help
Entry
556864 CDS
T01004
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
556864 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
556864 (ube3b)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
556864 (ube3b)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
HECT type E3
556864 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
556864
NCBI-ProteinID:
NP_001108154
ZFIN:
ZDB-GENE-060526-231
Ensembl:
ENSDARG00000061960
UniProt:
A0A8N1YZY7
LinkDB
All DBs
Position
5:20172915..20201015
Genome browser
AA seq
1069 aa
AA seq
DB search
MFTATQTSKTQFLDKARVAREERKGHKEKERAATQIQALVRRFLCRCRLQKEIRKEVDDF
IAVSDAGPTKRNALSIFKIARKLLFILSKDDKLRFEKLCRIILNSMDVENEPKVWYVSLA
LSKDLTILWLKQIKDVLWVSCEFLKKLKPDILQDNKLVTLYLTMLITFTDTSTWKIIRGK
GEALKPALNRICENIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGTLTAIFTLSLRPVI
AAHFSDNLLRSFLLHVMSVPAFISHLNTLTPDCMITIQTHDLFRKFVLFLSREEQCLDIC
VCLEGSHTLCLLGNLIQLGYFNVKVLEQEAGHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQCLWGVPVICTLFCDVLSKKLETQDPTPPPAPQPSS
LQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALTTLTQIRL
QILTGLTYLDELLPKLWAFICELGPQGGLRLFLECLNNDTEESKQLLAMLMLFCDCSRHL
ITILDDIEVYEEQISFKMEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLM
VLYERDCRRRFTPEDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRN
IVTKEKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLG
VDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSSIHENHLQLFEFVG
KMLGKAMYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGD
VSDLGLTLSYDEEVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAF
IRGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVILWLWDI
LSSDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFF
TIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgccacccaaacatccaaaacccagttcctggataaagccagggtagcacgg
gaggaaagaaaaggtcataaggaaaaagaaagagctgccacacaaatccaggctctggtc
agaaggtttctctgccgctgcaggctgcaaaaagaaatcaggaaagaggtcgatgacttc
attgcagtgagcgatgccggtcctacaaaaagaaatgcattatccatctttaaaattgct
agaaagttgctatttatattgagcaaggatgataagttgaggtttgagaagttgtgcaga
atcatattgaatagcatggatgttgagaatgaacctaaagtgtggtatgtgtctctggct
ctttcgaaagatctcaccatcctctggctaaaacaaatcaaagacgttctttgggtctca
tgtgaatttctgaaaaaactaaagcctgacattctgcaagataacaaattggtgacactg
tacttgacaatgttgattaccttcaccgacacatcgacatggaaaatcatccgagggaag
ggagaagcccttaagcctgctttaaacaggatttgtgagaacatcatgggacatctaaat
caaaagggcttctactctgttcttcagattctactcacaaatggattggcaagatccaga
ccttctctttccaaaggaaccctcacggccatttttacgctgtcactcaggcctgttatc
gctgcacatttctctgacaacctgctgaggtctttcctcctgcacgtcatgtctgttcca
gcgttcatctcgcatctcaacacactcactccagattgcatgatcaccatccagacccat
gacctttttcgcaagtttgtcttgtttttaagccgagaggagcagtgtttggatatctgt
gtctgtctggagggaagccacactctgtgcttgctgggaaacctcattcagctcggatac
tttaatgtgaaagttctagaacaggaagcaggtcactttgtcaaggatcttacagatatg
ttgtcatactgtcagagatatgtgtctcagaagaaatccaatctcacacattggcaccca
gtgttgggctggttctcccagactgttgattatgggcttaatgaatctatgccattggta
acaaagcagctgcagtgtctgtggggagttccagtgatctgcactctgttctgtgatgtt
cttagcaaaaagcttgaaactcaagaccccacacccccaccagctcctcagccaagctca
ttgcagaataacctgcccgtcaaaaatctgttcaagcgagcattccagaaatctgcttct
gtgcggaacatcctgaagccggtcggggggaagcgtgtggactctgctgaggtccagaag
gtgtgtagtatctgtgtgctgtatcagacggccctcaccacactcacacaaatccgtctg
cagattctcacaggactgacatatctggatgaattgctgcctaagctgtgggcatttatc
tgtgagctcggccctcaggggggactccgactcttcctggagtgtctcaataatgacacg
gaggaatccaaacagctcctggccatgctgatgctcttctgtgactgctccagacacctc
atcactattctggatgacattgaggtgtacgaggaacagatttctttcaaaatggaagag
cttgtcacgatctcctcattccttaacacatttgtatataagatggtctgggatggtatt
ttagagaacgccaaaggggagaagttggacttattccacagtgttcacggctggctgatg
gttttgtacgagagggactgtcgcaggagattcacgcctgaagatcactggctccgcaag
gacctgaagcccagcctactgttccaagagctggagaaaggcaaaaagagagcgcagctg
ctgcttcagtacattcctcatgtcatcccacataaaaatagggtgctgctgttcaggaac
atagtgacaaaagagaaggagactctaggattggtggaaacaagctccgcctctcctcat
gtgacccatataacgattcgtcgttcacgcatgttggaggacggttatgatcagctgcgg
cgtctacctgtcaactccattaagggagtgatccgagtgaagtttgtcaatgatttagga
gtggacgaggctggaattgaccaggatggtgtatttaaagaattcttagaggagatcatc
aaaaaggttttcaacccagcactcaatctgtttaagaccaccagtgggaatgagagatta
tacccctccccaacctccagcatccatgagaaccaccttcagctgtttgaatttgtgggg
aagatgctgggaaaggccatgtatgaaggcattgtggtggacgtgccgtttgcctctttt
ttcctcagtcaggttctgggtcaccatcacagcaccttctatagctccatagatgagctg
ccctcgctcgactccgagttttacaaaaacctcacctccattaagcgttatgatggggat
gtcagtgaccttggtctaactttatcctatgatgaagaggttatggggcagttagtctgt
catgagctcattcctggtggaaagactatgcctgtcactaatgaaaacaagatcagctat
atccacctgatggcccatttccgcatgcacactcagatcaaggagcagacggctgcattc
atcaggggctttcgcagcatcatcaacccagagtggctgcacatgttttctaccccggag
gtccagaggctcatctcgggagacaacgctgagatagatctggatgatctcaaaaagcac
actgtgtactatggaggtttccatagcagccacagagtcattctttggctgtgggacatc
ctctctagtgacttcacccctgatgagagagccatgttcctgaagtttgtcaccagctgc
tcaagacctcctcttctcggttttgcctacctcaaacctcctttctccattcgttgtgtg
gaagtgtccgacgatcaggacacgggcgacactttaggtagtgttctgcggggcttcttc
accatacgtaagaaagagcccggcggtcgtctccctacatcctccacttgtttcaacctt
ctcaagctgcccaactacagcaagaagagcatcctcagagacaaactccgctacgccatc
agcatgaacactggctttgagctgtcataa
DBGET
integrated database retrieval system
